shinyMethyl (version 1.6.2)

shinySummarize-methods: Summarizing a large 450K experiment into a shinyMethylSet

Description

Summarizing methylation data from a RGChannelSet or GenomicRatioSet into a shinyMethylSet needed to launch the interactive interface of shinyMethyl.

Usage

## S3 method for class 'RGChannelSet':
shinySummarize(object)
## S3 method for class 'GenomicRatioSet':
shinySummarize(object)

Arguments

object

Either a RGChannelSet or a GenomicRatioSet.

Details

Either a RGChannelSet is transformed into a shinyMethylSet, or a GenomicRatioSet is transformed to a shinyMethylSet

See Also

shinyMethylSet for the output object and RGChannelSet or GenomicRatioSet for the input object.

Examples

if (require(minfiData)){
  library(minfiData)
  summarized.data <- shinySummarize(RGsetEx)
}