centromeres.hg38

<p>location of centromeres at genome build hg38</p>

Contains functions for identification of
copy number signatures (Geoffrey et al. (2018) <doi:10.1038/s41588-018-0179-8>) and
mutation signatures (Alexandrov et al. (2013) <doi:10.1038/nature12477>)
by non-negative matrix factorization, signature analysis and visualization.
It can be used to capture signatures of genomic variation, compare genotype or
phenotype features of different signatures and thus uncover the relationship
between the mechanism of genomic variation and phenotypes in cancer.

Shixiang Wang

sigminer

Capture Genomic Variation Signatures using Non-Negative Matrix
Factorization

Geoffrey Macintyre

Xue-Song Liu

centromeres.hg38 function

Format

location of centromeres at genome build hg38 — centromeres.hg38

location of centromeres at genome build hg38

centromeres.hg38: location of centromeres at genome build hg38

Description

Arguments

Format

Examples