chromsize.hg19

<p>chromosome size of genome build hg19</p>

Contains functions for identification of
copy number signatures (Geoffrey et al. (2018) <doi:10.1038/s41588-018-0179-8>) and
mutation signatures (Alexandrov et al. (2013) <doi:10.1038/nature12477>)
by non-negative matrix factorization, signature analysis and visualization.
It can be used to capture signatures of genomic variation, compare genotype or
phenotype features of different signatures and thus uncover the relationship
between the mechanism of genomic variation and phenotypes in cancer.

Shixiang Wang

sigminer

Capture Genomic Variation Signatures using Non-Negative Matrix
Factorization

Geoffrey Macintyre

Xue-Song Liu

chromsize.hg19 function

Format

chromosome size of genome build hg19 — chromsize.hg19

chromosome size of genome build hg19

chromsize.hg19: chromosome size of genome build hg19

Description

Arguments

Format

Examples