transcript.hg19

<p>Merged Transcript Location at Genome Build hg19</p>

Genomic alterations including single nucleotide
substitution, copy number alteration, etc. are the major force for
cancer initialization and development. Due to the specificity of
molecular lesions caused by genomic alterations, we can generate
characteristic alteration spectra, called 'signature' (Wang, Shixiang,
et al.  (2020) <DOI:10.1101/2020.04.27.20082404> & Alexandrov, Ludmil
B., et al. (2020) <DOI:10.1038/s41586-020-1943-3> & Macintyre, Geoff,
et al. (2018) <DOI:10.1038/s41588-018-0179-8>).  This package helps
users to extract, analyze and visualize signatures from genomic
alteration records, thus providing new insight into cancer study.

Shixiang Wang

sigminer

Extract, Analyze and Visualize Signatures for Genomic Variations

Xue-Song Liu

Tao Wu

Ziyu Tao

Geoffrey Macintyre

Anand Mayakonda

transcript.hg19 function

Format

Merged Transcript Location at Genome Build hg19 — transcript.hg19

Merged Transcript Location at Genome Build hg19

transcript.hg19: Merged Transcript Location at Genome Build hg19

Description

Arguments

Format

Examples