sim1000G (version 1.3)

generateFakeGeneticMap: Generates a fake genetic map.

Description

Generates a fake genetic map by approximating 1 cm / Mbp. Only used for examples.

Usage

generateFakeGeneticMap()

Examples

# NOT RUN {
library("sim1000G")

examples_dir = system.file("examples", package = "sim1000G")
vcf_file = sprintf("%s/region.vcf.gz", examples_dir)
vcf = readVCF( vcf_file, maxNumberOfVariants = 100 , min_maf = 0.12 ,max_maf = NA)

# For realistic data use the functions downloadGeneticMap / readGeneticMap
generateFakeGeneticMap()

# }