generate.map

Generate map data with marker information.

Data simulator including genotype, phenotype, pedigree,
selection and reproduction in R. It simulates most of reproduction process
of animals or plants and provides data for GS (Genomic Selection),
GWAS (Genome-Wide Association Study), and Breeding.
For ADI model, please see Kao C and Zeng Z (2002) <doi:10.1093/genetics/160.3.1243>.
For build.cov, please see B. D. Ripley (1987) <ISBN:9780470009604>.

Xiaolei Liu

simer

Data Simulation for Life Science and Breeding

generate.map function

<dl><dt>species</dt>
<dd>the species of genetic map, which can be "arabidopsis", "cattle", "chicken", "dog", "horse", "human", "maize", "mice", "pig", and "rice".</dd>
<dt>pop.marker</dt>
<dd>the number of markers.</dd>
<dt>num.chr</dt>
<dd>the number of chromosomes.</dd>
<dt>len.chr</dt>
<dd>the length of chromosomes.</dd></dl>

Arguments

Author

Marker information — generate.map

<dl>

<dt>species</dt>
<dd>the species of genetic map, which can be "arabidopsis", "cattle", "chicken", "dog", "horse", "human", "maize", "mice", "pig", and "rice".</dd>


<dt>pop.marker</dt>
<dd>the number of markers.</dd>


<dt>num.chr</dt>
<dd>the number of chromosomes.</dd>


<dt>len.chr</dt>
<dd>the length of chromosomes.</dd>

</dl>

generate.map: Marker information

Description

Usage

Value

Arguments

Author

Details

Examples