Learn R Programming

similaRpeak (version 1.4.2)

Metrics to estimate a level of similarity between two ChIP-Seq profiles

Description

This package calculates metrics which assign a level of similarity between ChIP-Seq profiles.

Copy Link

Version

Version

1.4.2

License

Artistic-2.0

Issues

0

Pull Requests

0

Stars

7

Forks

1

Maintainer

Astrid Deschenes

Last Published

February 15th, 2017

Functions in similaRpeak (1.4.2)

demoProfiles

Selected ChIP-seq profiles related to enhancers H3K27ac and H3K4me1 (for demonstration purpose)
similaRpeak

similaRpeak: Metrics to estimate a level of similarity between two ChIP-Seq profiles
similarity

Calculate metrics which estimate the level of similarity between two ChIP-Seq profiles
MetricFactory-class

MetricFactory object
chr7Profiles

ChIP-Seq profiles of region chr7:61968807-61969730 related to enhancers H3K27ac and H3K4me1 (for demonstration purpose)