simpleaffy (version 2.48.0)

qc.get.spikes: Retrieve QC spike probeset names for the current array type

Description

Get the names of spike probesets for bioB, bioC, etc. ratios for the current array type. qc.get.probes is used to define the 3'/5' ratio probesets

Usage

qc.get.spikes()
 qc.get.spike(name)
 qc.add.spike(name,probeset)

Arguments

name

A name for the given probeset. By default, this is the probeset identifier

probeset

A probeset ID

Value

• A character array of probeset IDs, or the requested probeset ID, as appropriate.

References

http://bioinformatics.picr.man.ac.uk/

See Also

setQCEnvironment qc.get.probes

Examples

qc.get.spikes()
  qc.add.spike("my.name","a.probesetid_at")
  qc.add.spike("another.name","another.probesetid_at")
  qc.get.spikes()