singleCellHaystack (version 0.3.4)

write_haystack: Function to write haystack result data to file.

Description

Function to write haystack result data to file.

Usage

write_haystack(res.haystack, file)

Arguments

res.haystack

A 'haystack' result variable

file

A file to write to

Examples

# using the toy example of the singleCellHaystack package
# define a logical matrix with detection of each gene (rows) in each cell (columns)
dat.detection <- dat.expression > 1

# running haystack in default mode
res <- haystack(dat.tsne, detection=dat.detection, method = "2D")

outfile <- file.path(tempdir(), "output.csv")

# write result to file outfile.csv
write_haystack(res, file = outfile)

# read in result from file
res.copy <- read_haystack(file = outfile)