plot_pedigree

Utilities for single nucleotide polymorphism (SNP) based kinship analysis
testing and evaluation. The 'skater' package contains functions for importing, parsing,
and analyzing pedigree data, performing relationship degree inference, benchmarking
relationship degree classification, and summarizing identity by descent (IBD) segment data.
Package functions and methods are described in Turner et al. (2021) "skater: An R package
for SNP-based Kinship Analysis, Testing, and Evaluation" <doi:10.1101/2021.07.21.453083>.

Stephen Turner

skater

Utilities for SNP-Based Kinship Analysis

Matthew Scholz

VP Nagraj

Signature Science, LLC. 

plot_pedigree function

<dl><dt>ped</dt>
<dd>List of pedigree objects from fam2ped</dd>
<dt>file</dt>
<dd>Output file path (must end in ".pdf")</dd>
<dt>width</dt>
<dd>Width of output PDF</dd>
<dt>height</dt>
<dd>Height of output PDF</dd></dl>

Arguments

Plot pedigree — plot_pedigree

<dl>

<dt>ped</dt>
<dd>List of pedigree objects from fam2ped</dd>


<dt>file</dt>
<dd>Output file path (must end in ".pdf")</dd>


<dt>width</dt>
<dd>Width of output PDF</dd>


<dt>height</dt>
<dd>Height of output PDF</dd>

</dl>

plot_pedigree: Plot pedigree

Description

Usage

Value

Arguments