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sme (version 0.4)

Smoothing-splines Mixed-effects Models

Description

A package for fitting smoothing-splines mixed-effects models to replicated functional data sets.

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Version

Install

install.packages('sme')

Monthly Downloads

18

Version

0.4

License

GPL (>= 3)

Maintainer

Maurice Berk

Last Published

September 18th, 2012

Functions in sme (0.4)

getRoughnessMatrix

Extract the roughness matrix used in an SME model fit
plot.sme

Visualisation of smoothing-splines mixed-effects models
inflammatory

Example gene transcript from an experiment on children suffering from an inflammatory condition
smeObject

Fitted sme Object
plotSmeModel

Visualisation of a fitted smoothing-splines mixed-effects model
plotSmeRaw

Visualisation of raw data for a smoothing-splines mixed-effects model
BICn

An alternative BIC for longitudinal models
plotSmeDiagnostic

Diagnostic plot of the residuals for a fitted smoothing-splines mixed-effects model
sme

Smoothing-splines mixed-effects models
sme.list

Carry out mulitple independent smoothing-splines mixed-effects model fits simultaneously
AICc

The corrected AIC
sme.data.frame

Smoothing-splines mixed-effects model fit(s) from a data.frame object
MTB

Ten example gene transcripts from an experiment investigating the in vitro transcriptional response to M.Tuberculosis