resolve_groupings

Internal helper used by <code>compute_matrix()</code> to translate user-facing
grouping specs into the participant- and contact-side column names that
the matrix machinery joins on.
Each entry of <code>by</code> may be:<ul>
<li>the string <code>"age"</code> — special-cased to the package's existing
convention (<code>age.group</code> on participants, <code>contact.age.group</code> on
contacts), as produced by <code>assign_age_groups()</code>.</li>
<li>any other single string <code>"&lt;stem&gt;"</code> — resolves to <code>part_&lt;stem&gt;</code> on
participants and <code>cnt_&lt;stem&gt;</code> on contacts (the package's existing
convention for raw survey columns, e.g. <code>part_gender</code> / <code>cnt_gender</code>).</li>
<li>a named two-element character vector <code>c(part = "X", cnt = "Y")</code> — an
explicit override.</li>
</ul>

internal

Methods for sampling contact matrices from diary data for
use in infectious disease modelling, as discussed in Mossong et al.
(2008) <doi:10.1371/journal.pmed.0050074>.

Sebastian Funk

socialmixr

Social Mixing Matrices for Infectious Disease Modelling

Lander Willem

Hugo Gruson

Nicholas Tierney

Maria Bekker-Nielsen Dunbar

Carl A. B. Pearson

Sam Clifford

Christopher Jarvis

Alexis Robert

Niel Hens

Pietro Coletti

Lloyd Chapman

resolve_groupings function

<dl><dt>by</dt>
<dd>character vector or list of entries as described above</dd></dl>

Arguments

Resolve grouping specifications to participant/contact column pairs — resolve_groupings

<dl>

<dt>by</dt>
<dd>character vector or list of entries as described above</dd>

</dl>

Resolve grouping specifications to participant/contact column pairs

resolve_groupings: Resolve grouping specifications to participant/contact column pairs

Description

Usage

Value

Arguments