fetchVegdata: Get vegetation plot data from local NASIS database

Description

Convenience function for loading most commonly used Vegetation Plot information from local NASIS database.

Usage

fetchVegdata(
  SS = TRUE,
  include_pedon = TRUE,
  stringsAsFactors = NULL,
  dsn = NULL
)
get_vegplot_from_NASIS_db(SS = TRUE, stringsAsFactors = NULL, dsn = NULL)
get_vegplot_location_from_NASIS_db(
  SS = TRUE,
  stringsAsFactors = NULL,
  dsn = NULL
)
get_vegplot_trhi_from_NASIS_db(SS = TRUE, stringsAsFactors = NULL, dsn = NULL)
get_vegplot_species_from_NASIS_db(
  SS = TRUE,
  stringsAsFactors = NULL,
  dsn = NULL
)
get_vegplot_transect_from_NASIS_db(
  SS = TRUE,
  stringsAsFactors = NULL,
  dsn = NULL
)
get_vegplot_transpecies_from_NASIS_db(
  SS = TRUE,
  stringsAsFactors = NULL,
  dsn = NULL
)
get_vegplot_transpoints_from_NASIS_db(SS = TRUE, dsn = NULL)
get_vegplot_prodquadrats_from_NASIS_db(SS = TRUE, dsn = NULL)
get_vegplot_tree_si_summary_from_NASIS_db(
  SS = TRUE,
  stringsAsFactors = NULL,
  dsn = NULL
)
get_vegplot_speciesbasalarea_from_NASIS(SS = TRUE, dsn = NULL)
get_vegplot_tree_si_details_from_NASIS_db(
  SS = TRUE,
  stringsAsFactors = NULL,
  dsn = NULL
)
get_vegplot_textnote_from_NASIS_db(
  SS = TRUE,
  fixLineEndings = TRUE,
  stringsAsFactors = NULL,
  dsn = NULL
)

Value

A named list containing: "vegplot", "vegplotlocation", "vegplotrhi", "vegplotspecies", "vegtransect", "vegtransplantsum", 'vegsiteindexsum', "vegsiteindexdet", "vegbasalarea", and "vegplottext" tables

Arguments

SS: fetch data from the currently loaded selected set in NASIS or from the entire local database (default: TRUE)
include_pedon: Include pedon and transect data joined to site? (default: TRUE). If include_pedon is set to "assocuserpedonid" only pedon records that are linked through the Associated User Pedon ID column will have their peiid reported in the vegplot table.
stringsAsFactors: deprecated
dsn: Optional: path to local SQLite database containing NASIS table structure; default: NULL
fixLineEndings: Replace '\r\n' with '\n'; Default: TRUE