solarius (version 0.2.3)

dat30: dat30 data set adapted from multic R package

Description

29 first families were selected from the complete data set of 12000 individuals. For a resulted subset of 174 individuals, a hundred of synthetic SNPs were randomly generated. Annotation information also was generated, mainly in order to plot the association results with Manhattan plot.

Usage

dat30
genocovdat30
mapdat30

source

http://cran.r-project.org/web/packages/multic/

Details

Two simulated phenotypes possess a high genetic correlation.

Examples

data(dat30)

str(dat30)

plotPed(dat30, 2) # plot the pedigree tree for family #2

kin2 <- solarKinship2(dat30)
plotKinship2(kin2)
plotKinship2(kin2[1:30, 1:30])
str(genocovdat30)

genocovdat30[1:5, 1:5]
str(mapdat30)

head(mapdat30)