plot.solarAssoc

print.solarAssoc

solarAssocClass

summary.solarAssoc

An object of class <code>solarAssoc</code>.

Character argument for <code>plot</code> method,
indicating the type of plot.
The default value is <code>"manh"</code>.

object

Numeric argument between 0 and 1 for <code>summary</code> method,
indicating the significance level after Bonferroni multiple-test correction.
The default value is 0.05.

alpha

SOLAR is the standard software program to perform linkage and
association mappings of the quantitative trait loci (QTLs) in pedigrees of
arbitrary size and complexity. This package allows the user to exploit the
variance component methods implemented in SOLAR. It automates such routine
operations as formatting pedigree and phenotype data. It also parses the model
output and contains summary and plotting functions for exploration of the
results. In addition, solarius enables parallel computing of the linkage and
association analyses, that makes the calculation of genome-wide scans more
efficient. See <http://solar.txbiomedgenetics.org/> for more information about
SOLAR.

solarAssocClass: S3 class solarAssoc.

Description

Usage

Arguments