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spAbundance (version 0.2.1)

fitted.sfMsDS: Extract Model Fitted Values for sfMsDS Object

Description

Method for extracting model fitted values and cell-specific detection probabilities from a spatial factor multi-species hierarchical distance sampling (sfMsDS) model.

Usage

# S3 method for sfMsDS
fitted(object, ...)

Value

A list comprised of:

y.rep.samples

A four-dimensional numeric array of fitted values for use in Goodness of Fit assessments. Array dimensions correspond to MCMC samples, species, sites, and distance bin.

pi.samples

A four-dimensional numeric array of cell-specific detection probability values. Values correspond to the probability of detecting an individual within a given distance band at a given location. Array dimensions correspond to MCMC samples, species, sites, and distance band.

Arguments

object

object of class sfMsDS.

...

currently no additional arguments

Details

A method to the generic fitted function to extract fitted values and detection probabilities for fitted model objects of class sfMsDS.