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spAbundance (version 0.2.1)

summary.spAbund: Methods for spAbund Object

Description

Methods for extracting information from fitted univariate spatially-explicit GLMMs (spAbund).

Usage

# S3 method for spAbund
summary(object, quantiles = c(0.025, 0.5, 0.975), 
        digits = max(3L, getOption("digits") - 3L), ...)
# S3 method for spAbund
print(x, ...)
# S3 method for spAbund
plot(x, param, density = TRUE, ...)

Value

No return value, called to display summary information of a spAbund object.

Arguments

object, x

object of class spAbund.

quantiles

for summary, posterior distribution quantiles to compute.

digits

for summary, number of digits to report.

param

parameter name for which to generate a traceplot. Valid names are "beta", "beta.star", "sigma.sq.mu", "tau.sq", "theta".

density

logical value indicating whether to also generate a density plot for each parameter in addition to the MCMC traceplot.

...

currently no additional arguments

Details

A set of standard extractor functions for fitted model objects of class spAbund, including methods to the generic functions print, summary, plot.