spaMM (version 1.9.16)

blackcap: Genetic polymorphism in relation to migration in the blackcap

Description

This data set is extracted from a study of genetic polymorphisms potentially associated to migration behaviour in the blackcap (Sylvia atricapilla). Across different populations in Europe and Africa, the average migration behaviour was found to correlate with average allele size (dependent on the number of repeats of a small DNA motif) at the locus ADCYAP1, encoding a neuropeptide.

Usage

data(blackcap)

Arguments

Format

The data frame includes 14 observations on the following variables:

Source

Data from Mueller et al. (2011), including supplementary material retrieved from http://rspb.royalsocietypublishing.org/content/suppl/2011/02/11/rspb.2010.2567.DC1.

Details

Migration status was coded as : pure resident populations as '0', resident populations with some migratory restlessness as '0.5', partial migratory populations as '1', completely migratory populations migrating short-distances as '1.5', intermediate-distance migratory populations as '2' and distinct long-distance migratory populations as '2.5'.

References

Mueller, J. C., Pulido, F., and Kempenaers, B. 2011. Identification of a gene associated with avian migratory behaviour, Proc. Roy. Soc. (Lond.) B 278, 2848-2856.

Examples

Run this code
## see 'corrHLfit' and 'fixedLRT' for examples involving these data

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