Fitting generalized linear models without initial-value or divergence headaches
Multiple-Stage False Discovery Rate procedure
Matern correlation function and Matern formula term.
Interpolated Markov Random Field models
Simulated data set for testing sparse-precision code
Fit mixed models with given correlation matrix
Loa loa prevalence in North Cameroon, 1991-2001
Conway-Maxwell-Poisson (COM-Poisson) GLM family
ZAXlist class and (cross) products for ZAL matrix
Cauchy correlation function and Cauchy formula term
Assessing convergence for fitted models
Functions to extract various components of a fit
Likelihood ratio test of fixed effects.
Internal functions for procedure using the ((I,0),(Z,X)) block-order
Extractors for information criteria such as AIC
Fits a (spatially) correlated mixed model, for given correlation parameters
Genetic polymorphism in relation to migration in the blackcap
Confidence intervals for fixed-effect parameters
Matern Correlation Structure as a corSpatial object
Fitting function for fixed- and mixed-effect models with GLM response.
Prediction from models with nearly-singular covariance matrices
Arabidopsis genetic and climatic data
Likelihood ratio test of fixed effects.
Clear and trustworthy formulas
Extract information about how an object was obtained
Using a corrMatrix argument
Fits a mixed model, typically a spatial GLMM.
Extract matrices from a fit
Operations on lists of parameters
Model checking plots for mixed models
Partial-dependence effects and plots
Scaled distances between unique locations
Fitting autoregressive models
Specifying correlation structures
Distribution families for Gamma and inverse Gamma-distributed random effects
Salamander mating data
Prediction from a model fit.
Checking the rank of the fixed-effects design matrix
Colorful plots of predicted responses in two-dimensional space.
corr_family objects
Computation of “square root” of correlation matrix
Fixing some parameters
spaMM options settings
Checking for (quasi-)separation in binomial-response model.
Lip cancer in Scotland 1975 - 1980
Family function for GLMs and mixed models with negative binomial and zero-truncated negative binomial response.
Computation of “square root” of symmetric positive definite matrix
Freight dataset
Simulate realizations of a fitted model.
Level (Contour) Plots with better aspect ratio control (for geographical maps, at least)
Masks of seas or lands
Analyzing multinomial data
Seed germination data
Evaluating bootstrap replicates
Updates a fit
Inference in mixed models, in particular spatial GLMMs
S3 methods of generics defined in other packages
Fit mixed-effects models incorporating pedigrees
Estimation of prediction variance with bootstrap correction
Initiate a fit from another fit
Extract covariance or correlation components from a fitted model object
Summary and print methods for fit and test results.
Data from a resistivity experiment for semiconductor materials.
Singular Value Decomposition of a Symmetric Matrix
Fitting random effects in the residual dispersion model
A flashy color palette.
Welding data set
Parametric bootstrap
Family function for GLMs and mixed models with Poisson and zero-truncated Poisson response.
Applying post-fit procedures on spaMM results
spaMM conventions and differences from related fitting procedures
Reduce the size of fitted objects
Sparse_precision algorithm
Internal spaMM Functions