Learn R Programming
⚠️There's a newer version (0.2.5) of this package.Take me there.

spaa (version 0.1.1)

Species Association Analysis

Description

Package for species association analysis and plotting, including species matrix preparation from raw species list, lower matrix plotting, simple network plotting etc.

Copy Link

Version

Install

install.packages('spaa')

Monthly Downloads

562

Version

0.1.1

License

GPL-2

Maintainer

Jinlong Zhang

Last Published

June 1st, 2010

Functions in spaa (0.1.1)

plotnetwork

Correlation network plot
sp.assoc

Total species association
freq.calc

Species relative frequency
sp.pair

Species association between each pair of species
sub.sp.matrix

Subset species matrix according to relative frequency
testdata

Data used in example
add.col

Add one column from A to B, according to one column of common name.
data2mat

Convert species list data to species matrix
splist

species list used in function add.col()
spaa-package

Species Association Analysis
plotlowertri

Plotting lower semi matrix