preproc_svs

Preprocess and perform quality assessment of a single SVS data set.

Tools for reading, visualising and processing Magnetic Resonance
Spectroscopy data. The package includes methods for spectral fitting: Wilson
(2021) <DOI:10.1002/mrm.28385>, Wilson (2025) <DOI:10.1002/mrm.30462> and
spectral alignment: Wilson (2018) <DOI:10.1002/mrm.27605>.

Martin Wilson

spant

MR Spectroscopy Analysis Tools

Yong Wang

John Muschelli

preproc_svs function

<dl><dt>path</dt>
<dd>path to the MRS data file or IMA directory.</dd>
<dt>label</dt>
<dd>a label to describe the data set.</dd>
<dt>output_dir</dt>
<dd>output directory.</dd>
<dt>ref_inds</dt>
<dd>a vector of 1-based indices for any water reference dynamic
scans.</dd>
<dt>dyn_water_ref_path</dt>
<dd>path to interleaved water reference data file or
IMA directory.</dd></dl>

Arguments

Preprocess and perform quality assessment of a single SVS data set. — preproc_svs

<dl>

<dt>path</dt>
<dd>path to the MRS data file or IMA directory.</dd>


<dt>label</dt>
<dd>a label to describe the data set.</dd>


<dt>output_dir</dt>
<dd>output directory.</dd>


<dt>ref_inds</dt>
<dd>a vector of 1-based indices for any water reference dynamic
scans.</dd>


<dt>dyn_water_ref_path</dt>
<dd>path to interleaved water reference data file or
IMA directory.</dd>

</dl>

preproc_svs: Preprocess and perform quality assessment of a single SVS data set.

Description

Usage

Arguments