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sparseBC (version 1.2)

Sparse Biclustering of Transposable Data

Description

Implements the sparse biclustering proposal of Tan and Witten (2014), Sparse biclustering of transposable data. Journal of Computational and Graphical Statistics 23(4):985-1008.

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Version

Install

install.packages('sparseBC')

Monthly Downloads

25

Version

1.2

License

GPL (>= 2)

Maintainer

Kean Ming Tan

Last Published

March 19th, 2019

Functions in sparseBC (1.2)

sparseBC

Sparse biclustering
sparseBC.choosekr

Do tuning parameter K and R selection for sparse biclustering via cross-validation.
image.sparseBC

Image plot of an object of class sparseBC or matrixBC
matrixBC.BIC

Do tuning parameter (lambda) selection for MVN biclustering via BIC criterion
lung

Lung cancer gene expression data
matrixBC

MVN biclustering
summary.sparseBC

Plot an object of class sparseBC or matrixBC
sparseBC-package

Fit sparse biclustering and matrix-variate normal biclustering
sparseBC.BIC

Do tuning parameter (lambda) selection for sparse biclustering via BIC criterion