spatstat (version 1.12-5)

owin.object: Class owin

Description

A class owin to define the ``observation window'' of a point pattern

Warnings

In a window of type "mask", the row index corresponds to increasing $y$ coordinate, and the column index corresponds to increasing $x$ coordinate.

Details

In the spatstat library, a point pattern dataset must include information about the window or region in which the pattern was observed. A window is described by an object of class "owin". Windows of arbitrary shape are supported. An object of class "owin" has one of three types: ll{ "rectangle": a rectangle in the two-dimensional plane with edges parallel to the axes "polygonal": a region whose boundary is a polygon or several polygons. The region may have holes and may consist of several disconnected pieces. "mask": a binary image (a logical matrix) set to TRUE for pixels inside the window and FALSE outside the window. } Objects of class "owin" may be created by the function owin and converted from other types of data by the function as.owin.

They may be manipulated by the functions as.rectangle, as.mask, complement.owin, rotate, shift, affine, erode.owin, and erode.mask.

Geometrical calculations available for windows include area.owin, bounding.box, diameter, eroded.areas, bdist.points, bdist.pixels, and even.breaks.owin. The mapping between continuous coordinates and pixel raster indices is facilitated by the functions raster.x, raster.y and nearest.raster.point.

There is a plot method for window objects, plot.owin. This may be useful if you wish to plot a point pattern's window without the points for graphical purposes.

There are also methods for summary and print.

See Also

owin, as.owin, as.rectangle, as.mask, summary.owin, print.owin, complement.owin, erode.owin, affine.owin, shift.owin, rotate.owin, raster.x, raster.y, nearest.raster.point, plot.owin, area.owin, bounding.box, diameter, eroded.areas, bdist.points, bdist.pixels

Examples

w <- owin()
 w <- owin(c(0,1), c(0,1))
 # the unit square
  
 w <- owin(c(0,1), c(0,2))
 plot(w)
 # plots edges of a box 1 unit x 2 units
 v <- locator() 
 # click on points in the plot window
 # to be the vertices of a polygon 
 # traversed in anticlockwise order 
 u <- owin(c(0,1), c(0,2), poly=v)
 plot(u)
 # plots polygonal boundary using polygon()
 plot(as.mask(u, eps=0.02))
 # plots discrete pixel approximation to polygon