spatstat v1.21-5.1

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by Adrian Baddeley

Spatial Point Pattern analysis, model-fitting, simulation, tests

A package for analysing spatial data, mainly Spatial Point Patterns, including multitype/marked points and spatial covariates, in any two-dimensional spatial region. Also supports three-dimensional point patterns, and space-time point patterns in any number of dimensions. Contains over 1000 functions for plotting spatial data, exploratory data analysis, model-fitting, simulation, spatial sampling, model diagnostics, and formal inference. Data types include point patterns, line segment patterns, spatial windows, pixel images and tessellations. Exploratory methods include K-functions, nearest neighbour distance and empty space statistics, Fry plots, pair correlation function, kernel smoothed intensity, relative risk estimation with cross-validated bandwidth selection, mark correlation functions, segregation indices, mark dependence diagnostics etc. Point process models can be fitted to point pattern data using functions ppm, kppm, slrm similar to glm. Models may include dependence on covariates, interpoint interaction, cluster formation and dependence on marks. Fitted models can be simulated automatically. Also provides facilities for formal inference (such as chi-squared tests) and model diagnostics (including simulation envelopes, residuals, residual plots and Q-Q plots).

Functions in spatstat

Name Description
Extract.fv Extract Subset of Function Values
Hardcore The Hard Core Point Process Model
Fiksel The Fiksel Interaction
Fest Estimate the empty space function F
affine.psp Apply Affine Transformation To Line Segment Pattern
Kcross Multitype K Function (Cross-type)
chorley Chorley-Ribble Cancer Data
PairPiece The Piecewise Constant Pairwise Interaction Point Process Model
Iest Estimate the I-function
Kest K-function
affine Apply Affine Transformation
MultiStraussHard The Multitype/Hard Core Strauss Point Process Model
ants Harkness-Isham ants' nests data
DiggleGratton Diggle-Gratton model
Ord Generic Ord Interaction model
affine.owin Apply Affine Transformation To Window
clip.infline Intersect Infinite Straight Lines with a Window
coef.ppm Coefficients of Fitted Point Process Model
Gfox Foxall's Distance Functions
as.hyperframe Convert Data to Hyperframe
Extract.im Extract Subset of Image
Kinhom Inhomogeneous K-function
Poisson Poisson Point Process Model
LennardJones The Lennard-Jones Potential
Saturated Saturated Pairwise Interaction model
eem Exponential Energy Marks
bind.fv Combine Function Value Tables
cells Biological Cells Point Pattern
bdist.tiles Distance to Boundary of Window
colourtools Convert and Compare Colours in Different Formats
Gdot Multitype Nearest Neighbour Distance Function (i-to-any)
as.data.frame.psp Coerce Line Segment Pattern to a Data Frame
Strauss The Strauss Point Process Model
intersect.owin Intersection, Union or Set Subtraction of Two Windows
anemones Beadlet Anemones Data
as.ppp Convert Data To Class ppp
SatPiece Piecewise Constant Saturated Pairwise Interaction Point Process Model
convexhull.xy Convex Hull of Points
affine.ppp Apply Affine Transformation To Point Pattern
as.data.frame.im Convert Pixel Image to Data Frame
bei Tropical rain forest trees
bounding.box Bounding Box of a Window or Point Pattern
coef.slrm Coefficients of Fitted Spatial Logistic Regression Model
lansing Lansing Woods Point Pattern
anova.ppm ANOVA for Fitted Point Process Models
clickppp Interactively Add Points
crossdist.psp Pairwise distances between two different line segment patterns
Gcross Multitype Nearest Neighbour Distance Function (i-to-j)
DiggleGatesStibbard Diggle-Gates-Stibbard Point Process Model
diameter.box3 Geometrical Calculations for Three-Dimensional Box
Kdot Multitype K Function (i-to-any)
crossdist.ppx Pairwise Distances Between Two Different Multi-Dimensional Point Patterns
cut.ppp Classify Points in a Point Pattern
as.box3 Convert Data to Three-Dimensional Box
Extract.fasp Extract Subset of Function Array
BadGey Hybrid Geyer Point Process Model
diagnose.ppm Diagnostic Plots for Fitted Point Process Model
Kest.fft K-function using FFT
as.im Convert to Pixel Image
K3est K-function of a Three-Dimensional Point Pattern
distmap.owin Distance Map of Window
Extract.quad Subset of Quadrature Scheme
Extract.msr Extract Subset of Signed or Vector Measure
as.data.frame.ppp Coerce Point Pattern to a Data Frame
dirichlet.weights Compute Quadrature Weights Based on Dirichlet Tessellation
Jest Estimate the J-function
G3est Nearest Neighbour Distance Distribution Function of a Three-Dimensional Point Pattern
OrdThresh Ord's Interaction model
Jmulti Marked J Function
Lcross.inhom Inhomogeneous Cross Type L Function
compatible.fasp Test Whether Two Function Arrays Are Compatible
by.ppp Apply a Function to a Point Pattern Broken Down by Factor
Hest Spherical Contact Distribution Function
allstats Calculate four standard summary functions of a point pattern.
colourmap Colour Lookup Tables
default.rmhcontrol Set Default Control Parameters for Metropolis-Hastings Algorithm.
Gmulti Marked Nearest Neighbour Distance Function
markcorrint Mark Correlation Integral
blur Apply Gaussian Blur to a Pixel Image
discretise Safely Convert Point Pattern Window to Binary Mask
Extract.ppp Extract or Replace Subset of Point Pattern
crossdist.default Pairwise distances between two different sets of points
density.splitppp Kernel Smoothed Intensity of Split Point Pattern
deltametric Delta Metric
diameter Diameter of an Object
pairs.im Scatterplot Matrix for Pixel Images
areaLoss Difference of Disc Areas
disc Circular Window
distmap.ppp Distance Map of Point Pattern
envelope.pp3 Simulation Envelopes of Summary Function for 3D Point Pattern
bdist.pixels Distance to Boundary of Window
pcfcross Multitype pair correlation function (cross-type)
border Border Region of a Window
as.psp Convert Data To Class psp
Ldot Multitype L-function (i-to-any)
fv Create a Function Value Table
dummy.ppm Extract Dummy Points Used to Fit a Point Process Model
crossdist.ppp Pairwise distances between two different point patterns
hamster Aherne's hamster tumour data
eval.im Evaluate Expression Involving Pixel Images
demopat Artificial Data Point Pattern
duplicated.ppp Determine Duplicated Points in a Spatial Point Pattern
identify.ppp Identify Points in a Point Pattern
closing Morphological Closing
is.im Test Whether An Object Is A Pixel Image
fv.object Data Frames of Function Values
concatxy Concatenate x,y Coordinate Vectors
dilation Morphological Dilation
bronzefilter Bronze gradient filter data
effectfun Compute Fitted Effect of a Spatial Covariate in a Point Process Model
Kscaled Locally Scaled K-function
diameter.owin Diameter of a Window
plot.psp plot a Spatial Line Segment Pattern
anova.slrm Analysis of Deviance for Spatial Logistic Regression Models
im.object Class of Images
pp3 Three Dimensional Point Pattern
inside.owin Test Whether Points Are Inside A Window
eval.fv Evaluate Expression Involving Functions
erosion Morphological Erosion
identify.psp Identify Segments in a Line Segment Pattern
japanesepines Japanese Pines Point Pattern
dilated.areas Areas of Morphological Dilations
collapse.fv Collapse Several Function Tables into One
interp.im Interpolate a Pixel Image
fitted.slrm Fitted Probabilities for Spatial Logistic Regression
spatstat-internal Internal spatstat functions
MultiStrauss The Multitype Strauss Point Process Model
integral.im Integral of a Pixel Image
as.rectangle Window Frame
connected Connected components of an image or window
Kcross.inhom Inhomogeneous Cross K Function
is.multitype.ppp Test Whether A Point Pattern is Multitype
is.ppp Test Whether An Object Is A Point Pattern
compatible.im Test Whether Two Pixel Images Are Compatible
is.empty Test Whether An Object Is Empty
Lcross Multitype L-function (cross-type)
betacells Beta Ganglion Cells in Cat Retina
is.subset.owin Determine Whether One Window is Contained In Another
km.rs Kaplan-Meier and Reduced Sample Estimator using Histograms
Kdot.inhom Inhomogeneous Multitype K Dot Function
area.owin Area of a Window
Ldot.inhom Inhomogeneous Multitype L Dot Function
chop.tess Subdivide a Window or Tessellation using a Set of Lines
lgcp.estpcf Fit a Log-Gaussian Cox Point Process by Minimum Contrast
methods.pp3 Methods for three-dimensional point patterns
kaplan.meier Kaplan-Meier Estimator using Histogram Data
as.mask Pixel Image Approximation of a Window
Pairwise Generic Pairwise Interaction model
bounding.box.xy Convex Hull of Points
Extract.psp Extract Subset of Line Segment Pattern
is.marked Test Whether Marks Are Present
copper Berman-Huntington points and lines data
Lest L-function
kstest.ppm Kolmogorov-Smirnov Test for Point Process Model
expand.owin Expand Window By Factor
letterR Window in Shape of Letter R
npoints Number of Points in a Point Pattern
nndist.pp3 Nearest neighbour distances in three dimensions
pcfdot.inhom Inhomogeneous Multitype Pair Correlation Function (Type-i-To-Any-Type)
ppp Create a Point Pattern
crossdist.pp3 Pairwise distances between two different three-dimensional point patterns
gridweights Compute Quadrature Weights Based on Grid Counts
logLik.slrm Loglikelihood of Spatial Logistic Regression
amacrine Hughes' Amacrine Cell Data
markstat Summarise Marks in Every Neighbourhood in a Point Pattern
model.frame.ppm Extract the Environment of a Point Process Model
logLik.ppm Log Likelihood for Poisson Point Process Model
owin Create a Window
midpoints.psp Midpoints of Line Segment Pattern
nnwhich.pp3 Nearest neighbours in three dimensions
markconnect Mark Connection Function
mincontrast Method of Minimum Contrast
osteo Osteocyte Lacunae Data: Replicated Three-Dimensional Point Patterns
rmhcontrol Set Control Parameters for Metropolis-Hastings Algorithm.
nztrees New Zealand Trees Point Pattern
humberside Humberside Data on Childhood Leukaemia and Lymphoma
as.polygonal Convert a Window to a Polygonal Window
is.marked.ppm Test Whether A Point Process Model is Marked
density.ppp Kernel Smoothed Intensity of Point Pattern
is.multitype.ppm Test Whether A Point Process Model is Multitype
predict.ppm Prediction from a Fitted Point Process Model
bermantest Berman's Tests for Point Process Model
harmonic Basis for Harmonic Functions
mean.im Maximum, Minimum, Mean, Median, Range or Sum of Pixel Values in an Image
ppp.object Class of Point Patterns
periodify Make Periodic Copies of a Spatial Pattern
lut Lookup Tables
im Create a Pixel Image Object
clarkevans Clark and Evans Aggregation Index
pairdist.ppp Pairwise distances
methods.distfun Methods for Distance Functions
opening Morphological Opening
pcfcross.inhom Inhomogeneous Multitype Pair Correlation Function (Cross-Type)
hyperframe Hyper Data Frame
rpoispp Generate Poisson Point Pattern
inforder.family Infinite Order Interaction Family
levelset Level Set of a Pixel Image
pcf3est Pair Correlation Function of a Three-Dimensional Point Pattern
Softcore The Soft Core Point Process Model
relrisk Nonparametric Estimate of Spatially-Varying Relative Risk
plot.owin Plot a Spatial Window
rmh.ppm Simulate from a Fitted Point Process Model
pointsOnLines Place Points Evenly Along Specified Lines
matchingdist Distance for a Point Pattern Matching
infline Infinite Straight Lines
nncross Nearest Neighbours Between Two Patterns
bw.relrisk Cross Validated Bandwidth Selection for Relative Risk Estimation
ord.family Ord Interaction Process Family
pixellate.owin Convert Window to Pixel Image
pairdist.pp3 Pairwise distances in Three Dimensions
clickpoly Interactively Define a Polygon
spatstat-deprecated Deprecated spatstat functions
nbfires Point Patterns of New Brunswick Forest Fires
ripras Estimate window from points alone
nncorr Nearest-Neighbour Correlation Indices of Marked Point Pattern
dirichlet Dirichlet Tessellation of Point Pattern
psp Create a Line Segment Pattern
pixellate Convert Spatial Object to Pixel Image
eroded.areas Areas of Morphological Erosions
as.data.frame.hyperframe Coerce Hyperframe to Data Frame
rshift.ppp Randomly Shift a Point Pattern
rmhmodel.list Define Point Process Model for Metropolis-Hastings Simulation.
fitted.ppm Fitted Conditional Intensity for Point Process Model
convexhull Convex Hull
discpartarea Area of Part of Disc
distfun Distance Map as a Function
pairwise.family Pairwise Interaction Process Family
pairdist Pairwise distances
istat Point and Click Interface for Exploratory Analysis of Point Pattern
pixellate.ppp Convert Point Pattern to Pixel Image
compatible.fv Test Whether Two Function Objects Are Compatible
pppmatching.object Class of Point Matchings
plot.splitppp Plot a List of Point Patterns
pairdist.default Pairwise distances
predict.kppm Prediction from a Fitted Cluster Point Process Model
ganglia Beta Ganglion Cells in Cat Retina, Old Version
setcov Set Covariance of a Window
lurking Lurking variable plot
eval.fasp Evaluate Expression Involving Function Arrays
longleaf Longleaf Pines Point Pattern
plot.tess Plot a tessellation
is.multitype Test whether Object is Multitype
quad.object Class of Quadrature Schemes
plot.hyperframe Plot Entries in a Hyperframe
rMosaicSet Mosaic Random Set
persp.im Perspective Plot of Pixel Image
ppm.object Class of Fitted Point Process Models
rmhstart Determine Initial State for Metropolis-Hastings Simulation.
plot.listof Plot a List of Things
quad.ppm Extract Quadrature Scheme Used to Fit a Point Process Model
runifpointx Generate N Uniform Random Points in Any Dimensions
rStrauss Perfect Simulation of the Strauss Process
rNeymanScott Simulate Neyman-Scott Process
progressreport Print Progress Reports
quadscheme Generate a Quadrature Scheme from a Point Pattern
is.owin Test Whether An Object Is A Window
quadratcount Quadrat counting for a point pattern
rpoisline Generate Poisson Random Line Process
quantile.im Sample Quantiles of Pixel Image
rmpoint Generate N Random Multitype Points
plot.envelope Plot a Simulation Envelope
pcfdot Multitype pair correlation function (i-to-any)
msr Signed or Vector-Valued Measure
rotate.owin Rotate a Window
contour.im Contour plot of pixel image
lgcp.estK Fit a Log-Gaussian Cox Point Process by Minimum Contrast
localpcf Local pair correlation function
solutionset Evaluate Logical Expression Involving Pixel Images and Return Region Where Expression is True
rMatClust Simulate Matern Cluster Process
plot.fv Plot Function Values
rjitter Random Perturbation of a Point Pattern
cbind.hyperframe Combine Hyperframes by Rows or by Columns
summary.listof Summary of a List of Things
superimposePSP Superimpose Several Line Segment Patterns
shift.psp Apply Vector Translation To Line Segment Pattern
nnclean Nearest Neighbour Clutter Removal
pairdist.ppx Pairwise Distances in Any Dimensions
suffstat Sufficient Statistic of Point Process Model
reduced.sample Reduced Sample Estimator using Histogram Data
rescale.im Convert Pixel Image to Another Unit of Length
spatstat.options Internal Options in Spatstat Package
swedishpines Swedish Pines Point Pattern
summary.quad Summarizing a Quadrature Scheme
rescale Convert dataset to another unit of length
crossing.psp Crossing Points of Two Line Segment Patterns
residualspaper Data and Code From JRSS Discussion Paper on Residuals
rmh Simulate point patterns using the Metropolis-Hastings algorithm.
redwoodfull California Redwoods Point Pattern (Entire Dataset)
print.owin Print Brief Details of a Spatial Window
miplot Morishita Index Plot
plot.kstest Plot a Spatial Kolmogorov-Smirnov Test
nearestsegment Find Line Segment Nearest to Each Point
pixelquad Quadrature Scheme Based on Pixel Grid
endpoints.psp Endpoints of Line Segment Pattern
markvario Mark Variogram
ppx Multidimensional Space-Time Point Pattern
nndist.psp Nearest neighbour distances between line segments
localK Neighbourhood density function
tile.areas Compute Areas of Tiles in a Tessellation
plot.plotppm Plot a plotppm Object Created by plot.ppm
simulate.ppm Simulate a Fitted Gibbs Point Process Model
fitin.ppm Extract the Interaction from a Fitted Point Process Model
rThomas Simulate Thomas Process
rknn Theoretical Distribution of Nearest Neighbour Distance
pcf.fv Pair Correlation Function obtained from K Function
plot.quad plot a Spatial Quadrature Scheme
print.ppm Print a Fitted Point Process Model
rMaternII Simulate Matern Model II
unmark Remove Marks
heather Diggle's Heather Data
volume Volume of an Object
rotate.ppp Rotate a Point Pattern
intersect.tess Intersection of Two Tessellations
pairdist.psp Pairwise distances between line segments
rlinegrid Generate grid of parallel lines with random displacement
quadrat.test.splitppp Chi-Squared Test of CSR for Split Point Pattern
rshift Random Shift
spatstat-package The Spatstat Package
runifpointOnLines Generate N Uniform Random Points On Line Segments
predict.slrm Predicted or Fitted Values from Spatial Logistic Regression
ppm Fit Point Process Model to Data
rotate Rotate
runifpoint3 Generate N Uniform Random Points in Three Dimensions
quadratresample Resample a Point Pattern by Resampling Quadrats
tiles Extract List of Tiles in a Tessellation
shift.owin Apply Vector Translation To Window
redwood California Redwoods Point Pattern (Ripley's Subset)
smooth.fv Apply Smoothing to Function Values
spruces Spruces Point Pattern
tess Create a Tessellation
summary.splitppp Summary of a Split Point Pattern
rescale.psp Convert Line Segment Pattern to Another Unit of Length
rpoint Generate N Random Points
vertices Vertices of a Window
plot.slrm Plot a Fitted Spatial Logistic Regression
urkiola Urkiola Woods Point Pattern
rotate.psp Rotate a Line Segment Pattern
superimpose Superimpose Several Point Patterns
update.kppm Update a Fitted Cluster Point Process Model
rmpoispp Generate Multitype Poisson Point Pattern
rcell Simulate Baddeley-Silverman Cell Process
is.convex Test Whether a Window is Convex
trim.rectangle Cut margins from rectangle
print.psp Print Brief Details of a Line Segment Pattern Dataset
rmh.default Simulate Point Process Models using the Metropolis-Hastings Algorithm.
rmhmodel Define Point Process Model for Metropolis-Hastings Simulation.
union.quad Union of Data and Dummy Points
rpoisppOnLines Generate Poisson Point Pattern on Line Segments
rshift.splitppp Randomly Shift a List of Point Patterns
with.hyperframe Evaluate an Expression in Each Row of a Hyperframe
print.ppp Print Brief Details of a Point Pattern Dataset
is.ppm Test Whether An Object Is A Fitted Point Process Model
rmhmodel.default Build Point Process Model for Metropolis-Hastings Simulation.
as.owin Convert Data To Class owin
Extract.listof Extract or Replace Subset of a List of Things
scanpp Read Point Pattern From Data File
MultiHard The Multitype Hard Core Point Process Model
marktable Tabulate Marks in Neighbourhood of Every Point in a Point Pattern
F3est Empty Space Function of a Three-Dimensional Point Pattern
square Square Window
rMosaicField Mosaic Random Field
by.im Apply Function to Image Broken Down by Factor
Gest Nearest Neighbour Distance Function G
adaptive.density Intensity Estimate of Point Pattern Using Tessellation
methods.ppx Methods for Multidimensional Space-Time Point Patterns
Kmulti Marked K-Function
murchison Murchison gold deposits
rpoisppx Generate Poisson Point Pattern in Any Dimensions
stieltjes Compute Integral of Function Against Cumulative Distribution
rsyst Simulate systematic random point pattern
smooth.msr Smooth a Signed or Vector-Valued Measure
areaGain Difference of Disc Areas
unique.ppp Extract Unique Points from a Spatial Point Pattern
summary.ppm Summarizing a Fitted Point Process Model
centroid.owin Centroid of a window
split.im Divide Image Into Sub-images
which.max.im Identify Pixelwise Maximum of Several Pixel Images
markcorr Mark Correlation Function
summary.owin Summary of a Spatial Window
rstrat Simulate Stratified Random Point Pattern
vcov.ppm Variance-Covariance Matrix for a Fitted Point Process Model
pcf Pair Correlation Function
shift.im Apply Vector Translation To Pixel Image
selfcrossing.psp Crossing Points in a Line Segment Pattern
simdat Simulated Point Pattern
bw.stoyan Stoyan's Rule of Thumb for Bandwidth Selection
profilepl Profile Maximum Pseudolikelihood
clarkevans.test Clark and Evans Test
fryplot Fry Plot of Point Pattern
default.expand Compute Expansion Window for Simulation
default.dummy Generate a Default Pattern of Dummy Points
simplify.owin Approximate a Polygon by a Simpler Polygon
crossdist Pairwise distances
gridcentres Rectangular grid of points
rescue.rectangle Convert Window Back To Rectangle
incircle Find Largest Circle Inside Window
rlabel Random Re-Labelling of Point Pattern
density.psp Kernel Smoothing of Line Segment Pattern
iplot Point and Click Interface for Displaying a Point Pattern
summary.psp Summary of a Line Segment Pattern Dataset
nnwhich.ppx Nearest Neighbours in Any Dimensions
unitname Name for Unit of Length
ewcdf Weighted Empirical Cumulative Distribution Function
data.ppm Extract Original Data from a Fitted Point Process Model
gpc2owin Convert Polygonal Region into Different Format
latest.news Print News About Latest Version of Package
multiplicity.ppp Count Multiplicity of Duplicate Points
lengths.psp Lengths of Line Segments
update.ppm Update a Fitted Point Process Model
marks Marks of a Point Pattern
model.images Compute Images of Constructed Covariates
matclust.estK Fit the Matern Cluster Point Process by Minimum Contrast
nnwhich Nearest neighbour
varblock Estimate Variance of Summary Statistic by Subdivision
AreaInter The Area Interaction Point Process Model
Extract.tess Extract or Replace Subset of Tessellation
Kmeasure Reduced Second Moment Measure
pcfinhom Inhomogeneous Pair Correlation Function
Linhom L-function
pixellate.psp Convert Line Segment Pattern to Pixel Image
print.im Print Brief Details of an Image
plot.bermantest Plot Result of Berman Test
ponderosa Ponderosa Pine Tree Point Pattern
as.mask.psp Convert Line Segment Pattern to Binary Pixel Mask
rGaussPoisson Simulate Gauss-Poisson Process
qqplot.ppm Q-Q Plot of Residuals from Fitted Point Process Model
box3 Three-Dimensional Box
bramblecanes Hutchings' Bramble Canes data
boxx Multi-Dimensional Box
runifdisc Generate N Uniform Random Points in a Disc
rescale.ppp Convert Point Pattern to Another Unit of Length
delaunay Delaunay Triangulation of Point Pattern
shapley Galaxies in the Shapley Supercluster
slrm Spatial Logistic Regression
rpoispp3 Generate Poisson Point Pattern in Three Dimensions
smooth.ppp Spatial smoothing of observations at irregular points
envelope Simulation Envelopes of Summary Function
summary.ppp Summary of a Point Pattern Dataset
with.fv Evaluate an Expression in a Function Table
finpines Pine saplings in Finland.
fasp.object Function Arrays for Spatial Patterns
shift.ppp Apply Vector Translation To Point Pattern
kppm Fit cluster point process model
sharpen Data Sharpening of Point Pattern
thomas.estK Fit the Thomas Point Process by Minimum Contrast
methods.boxx Methods for Multi-Dimensional Box
nndist.ppx Nearest Neighbour Distances in Any Dimensions
pairsat.family Saturated Pairwise Interaction Point Process Family
perimeter Perimeter Length of Window
plot.fasp Plot a Function Array
plot.msr Plot a Signed or Vector-Valued Measure
plot.pp3 Plot a three-dimensional point pattern
plot.ppp plot a Spatial Point Pattern
rMaternI Simulate Matern Model I
rmhmodel.ppm Interpret Fitted Model for Metropolis-Hastings Simulation.
spokes Spokes pattern of dummy points
Emark Diagnostics for random marking
Jdot Multitype J Function (i-to-any)
Jcross Multitype J Function (i-to-j)
Replace.im Reset Values in Subset of Image
StraussHard The Strauss / Hard Core Point Process Model
applynbd Apply Function to Every Neighbourhood in a Point Pattern
angles.psp Orientation Angles of Line Segments
bdist.points Distance to Boundary of Window
coords Extract or Change Coordinates of a Spatial or Spatiotemporal Point Pattern
corners Corners of a rectangle
diameter.boxx Geometrical Calculations for Multi-Dimensional Box
distmap.psp Distance Map of Line Segment Pattern
hist.im Histogram of Pixel Values in an Image
is.marked.ppp Test Whether A Point Pattern is Marked
Geyer Geyer's Saturation Point Process Model
nearest.raster.point Find Pixel Nearest to a Given Point
Extract.splitppp Extract or Replace Sub-Patterns
append.psp Combine Two Line Segment Patterns
as.matrix.im Convert Pixel Image to Matrix or Array
as.hyperframe.ppx Extract coordinates and marks of multidimensional point pattern
complement.owin Take Complement of a Window
cut.im Convert Pixel Image from Numeric to Factor
plot.ppm plot a Fitted Point Process Model
as.tess Convert Data To Tessellation
distmap Distance Map
alltypes Calculate Summary Statistic for All Types in a Multitype Point Pattern
owin.object Class owin
reach Interaction Distance of a Point Process
matclust.estpcf Fit the Matern Cluster Point Process by Minimum Contrast Using Pair Correlation
methods.box3 Methods for Three-Dimensional Box
rescale.owin Convert Window to Another Unit of Length
residuals.ppm Residuals for Fitted Point Process Model
pcf.fasp Pair Correlation Function obtained from array of K functions
pcf.ppp Pair Correlation Function of Point Pattern
model.matrix.ppm Extract Design Matrix from Point Process Model
nndist Nearest neighbour distances
plot.colourmap Plot a Colour Map
plot.kppm Plot a fitted cluster point process
project2segment Move Point To Nearest Line
plot.im Plot a Pixel Image
psp.object Class of Line Segment Patterns
pppdist Distance Between Two Point Patterns
runifpoint Generate N Uniform Random Points
split.ppp Divide Point Pattern into Sub-patterns
print.quad Print a Quadrature Scheme
quadrats Divide Region into Quadrats
thomas.estpcf Fit the Thomas Point Process by Minimum Contrast
pppmatching Create a Point Matching
raster.x Cartesian Coordinates for a Pixel Raster
rhohat Smoothing Estimate of Covariate Transformation
quadrat.test Chi-Squared Dispersion Test for Spatial Point Pattern Based on Quadrat Counts
rSSI Simulate Simple Sequential Inhibition
rshift.psp Randomly Shift a Line Segment Pattern
summary.im Summarizing a Pixel Image
rpoislinetess Poisson Line Tessellation
rthin Random Thinning
shift Apply Vector Translation
simulate.kppm Simulate a Fitted Cluster Point Process Model
whist Weighted Histogram
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Details

Date 2011-02-10
License GPL (>= 2)
URL http://www.spatstat.org
Repository CRAN
Date/Publication 2011-03-21 14:59:03
Packaged 2011-03-21 12:57:37 UTC; ripley

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