spatstat v1.21-6

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by Adrian Baddeley

Spatial Point Pattern analysis, model-fitting, simulation, tests

A package for analysing spatial data, mainly Spatial Point Patterns, including multitype/marked points and spatial covariates, in any two-dimensional spatial region. Also supports three-dimensional point patterns, and space-time point patterns in any number of dimensions. Contains over 1000 functions for plotting spatial data, exploratory data analysis, model-fitting, simulation, spatial sampling, model diagnostics, and formal inference. Data types include point patterns, line segment patterns, spatial windows, pixel images and tessellations. Exploratory methods include K-functions, nearest neighbour distance and empty space statistics, Fry plots, pair correlation function, kernel smoothed intensity, relative risk estimation with cross-validated bandwidth selection, mark correlation functions, segregation indices, mark dependence diagnostics etc. Point process models can be fitted to point pattern data using functions ppm, kppm, slrm similar to glm. Models may include dependence on covariates, interpoint interaction, cluster formation and dependence on marks. Fitted models can be simulated automatically. Also provides facilities for formal inference (such as chi-squared tests) and model diagnostics (including simulation envelopes, residuals, residual plots and Q-Q plots).

Functions in spatstat

Name Description
Extract.im Extract Subset of Image
angles.psp Orientation Angles of Line Segments
Hest Spherical Contact Distribution Function
anova.ppm ANOVA for Fitted Point Process Models
G3est Nearest Neighbour Distance Distribution Function of a Three-Dimensional Point Pattern
DiggleGratton Diggle-Gratton model
alltypes Calculate Summary Statistic for All Types in a Multitype Point Pattern
concatxy Concatenate x,y Coordinate Vectors
as.data.frame.im Convert Pixel Image to Data Frame
affine.ppp Apply Affine Transformation To Point Pattern
bdist.points Distance to Boundary of Window
as.polygonal Convert a Window to a Polygonal Window
Emark Diagnostics for random marking
affine.psp Apply Affine Transformation To Line Segment Pattern
crossdist.ppx Pairwise Distances Between Two Different Multi-Dimensional Point Patterns
Kest.fft K-function using FFT
bounding.box Bounding Box of a Window or Point Pattern
is.ppp Test Whether An Object Is A Point Pattern
eroded.areas Areas of Morphological Erosions
OrdThresh Ord's Interaction model
is.im Test Whether An Object Is A Pixel Image
Jmulti Marked J Function
nndist.psp Nearest neighbour distances between line segments
dilation Morphological Dilation
hist.im Histogram of Pixel Values in an Image
nbfires Point Patterns of New Brunswick Forest Fires
matchingdist Distance for a Point Pattern Matching
bw.stoyan Stoyan's Rule of Thumb for Bandwidth Selection
coef.slrm Coefficients of Fitted Spatial Logistic Regression Model
clarkevans Clark and Evans Aggregation Index
complement.owin Take Complement of a Window
Lest L-function
clickppp Interactively Add Points
DiggleGatesStibbard Diggle-Gates-Stibbard Point Process Model
by.ppp Apply a Function to a Point Pattern Broken Down by Factor
ewcdf Weighted Empirical Cumulative Distribution Function
logLik.ppm Log Likelihood for Poisson Point Process Model
Jcross Multitype J Function (i-to-j)
latest.news Print News About Latest Version of Package
area.owin Area of a Window
SatPiece Piecewise Constant Saturated Pairwise Interaction Point Process Model
cut.ppp Classify Points in a Point Pattern
fitted.ppm Fitted Conditional Intensity for Point Process Model
as.owin Convert Data To Class owin
Kdot.inhom Inhomogeneous Multitype K Dot Function
fv Create a Function Value Table
Kinhom Inhomogeneous K-function
pcf3est Pair Correlation Function of a Three-Dimensional Point Pattern
dilated.areas Areas of Morphological Dilations
Poisson Poisson Point Process Model
fitin.ppm Extract the Interaction from a Fitted Point Process Model
is.multitype.ppm Test Whether A Point Process Model is Multitype
pairs.im Scatterplot Matrix for Pixel Images
pcfinhom Inhomogeneous Pair Correlation Function
opening Morphological Opening
clarkevans.test Clark and Evans Test
crossdist.psp Pairwise distances between two different line segment patterns
Iest Estimate the I-function
markstat Summarise Marks in Every Neighbourhood in a Point Pattern
affine Apply Affine Transformation
anemones Beadlet Anemones Data
compatible.fv Test Whether Two Function Objects Are Compatible
rMosaicSet Mosaic Random Set
default.rmhcontrol Set Default Control Parameters for Metropolis-Hastings Algorithm.
is.subset.owin Determine Whether One Window is Contained In Another
cut.im Convert Pixel Image from Numeric to Factor
persp.im Perspective Plot of Pixel Image
kppm Fit cluster point process model
compatible.im Test Whether Two Pixel Images Are Compatible
Replace.im Reset Values in Subset of Image
osteo Osteocyte Lacunae Data: Replicated Three-Dimensional Point Patterns
bdist.pixels Distance to Boundary of Window
lgcp.estpcf Fit a Log-Gaussian Cox Point Process by Minimum Contrast
quadratresample Resample a Point Pattern by Resampling Quadrats
Ldot.inhom Inhomogeneous Multitype L Dot Function
kaplan.meier Kaplan-Meier Estimator using Histogram Data
as.box3 Convert Data to Three-Dimensional Box
pairdist.ppp Pairwise distances
msr Signed or Vector-Valued Measure
nnwhich.pp3 Nearest neighbours in three dimensions
Extract.ppp Extract or Replace Subset of Point Pattern
integral.im Integral of a Pixel Image
closing Morphological Closing
colourmap Colour Lookup Tables
im.object Class of Images
Ldot Multitype L-function (i-to-any)
chop.tess Subdivide a Window or Tessellation using a Set of Lines
MultiStrauss The Multitype Strauss Point Process Model
distmap.psp Distance Map of Line Segment Pattern
murchison Murchison gold deposits
print.psp Print Brief Details of a Line Segment Pattern Dataset
pcfdot Multitype pair correlation function (i-to-any)
pairdist.ppx Pairwise Distances in Any Dimensions
default.expand Compute Expansion Window for Simulation
Hardcore The Hard Core Point Process Model
eval.fasp Evaluate Expression Involving Function Arrays
distmap.ppp Distance Map of Point Pattern
rescale.owin Convert Window to Another Unit of Length
density.psp Kernel Smoothing of Line Segment Pattern
kstest.ppm Kolmogorov-Smirnov Test for Point Process Model
japanesepines Japanese Pines Point Pattern
is.multitype Test whether Object is Multitype
pcfdot.inhom Inhomogeneous Multitype Pair Correlation Function (Type-i-To-Any-Type)
summary.im Summarizing a Pixel Image
pairdist.psp Pairwise distances between line segments
deltametric Delta Metric
intersect.tess Intersection of Two Tessellations
rhohat Smoothing Estimate of Covariate Transformation
ponderosa Ponderosa Pine Tree Point Pattern
summary.ppm Summarizing a Fitted Point Process Model
rNeymanScott Simulate Neyman-Scott Process
Strauss The Strauss Point Process Model
ppx Multidimensional Space-Time Point Pattern
rescale.psp Convert Line Segment Pattern to Another Unit of Length
nndist.pp3 Nearest neighbour distances in three dimensions
Extract.splitppp Extract or Replace Sub-Patterns
lgcp.estK Fit a Log-Gaussian Cox Point Process by Minimum Contrast
lengths.psp Lengths of Line Segments
plot.pp3 Plot a three-dimensional point pattern
spokes Spokes pattern of dummy points
diagnose.ppm Diagnostic Plots for Fitted Point Process Model
rcell Simulate Baddeley-Silverman Cell Process
crossdist.ppp Pairwise distances between two different point patterns
rpoislinetess Poisson Line Tessellation
square Square Window
pcf.ppp Pair Correlation Function of Point Pattern
tiles Extract List of Tiles in a Tessellation
plot.splitppp Plot a List of Point Patterns
methods.box3 Methods for Three-Dimensional Box
shift.ppp Apply Vector Translation To Point Pattern
letterR Window in Shape of Letter R
Softcore The Soft Core Point Process Model
crossdist.pp3 Pairwise distances between two different three-dimensional point patterns
is.convex Test Whether a Window is Convex
tile.areas Compute Areas of Tiles in a Tessellation
ripras Estimate window from points alone
runifpoint Generate N Uniform Random Points
areaGain Difference of Disc Areas
BadGey Hybrid Geyer Point Process Model
is.owin Test Whether An Object Is A Window
stieltjes Compute Integral of Function Against Cumulative Distribution
Linhom L-function
rstrat Simulate Stratified Random Point Pattern
spruces Spruces Point Pattern
demopat Artificial Data Point Pattern
localpcf Local pair correlation function
marks.psp Marks of a Line Segment Pattern
pointsOnLines Place Points Evenly Along Specified Lines
rpoisppOnLines Generate Poisson Point Pattern on Line Segments
suffstat Sufficient Statistic of Point Process Model
as.rectangle Window Frame
whist Weighted Histogram
bermantest Berman's Tests for Point Process Model
with.hyperframe Evaluate an Expression in Each Row of a Hyperframe
ord.family Ord Interaction Process Family
LennardJones The Lennard-Jones Potential
redwoodfull California Redwoods Point Pattern (Entire Dataset)
eem Exponential Energy Marks
rmpoint Generate N Random Multitype Points
Fiksel The Fiksel Interaction
Pairwise Generic Pairwise Interaction model
endpoints.psp Endpoints of Line Segment Pattern
shift.im Apply Vector Translation To Pixel Image
Saturated Saturated Pairwise Interaction model
distmap Distance Map
Geyer Geyer's Saturation Point Process Model
rmhmodel Define Point Process Model for Metropolis-Hastings Simulation.
sharpen Data Sharpening of Point Pattern
volume Volume of an Object
clickpoly Interactively Define a Polygon
K3est K-function of a Three-Dimensional Point Pattern
markcorrint Mark Correlation Integral
plot.colourmap Plot a Colour Map
Jest Estimate the J-function
dirichlet.weights Compute Quadrature Weights Based on Dirichlet Tessellation
update.kppm Update a Fitted Cluster Point Process Model
colourtools Convert and Compare Colours in Different Formats
pairsat.family Saturated Pairwise Interaction Point Process Family
areaLoss Difference of Disc Areas
plot.psp plot a Spatial Line Segment Pattern
plot.ppp plot a Spatial Point Pattern
Kdot Multitype K Function (i-to-any)
residuals.ppm Residuals for Fitted Point Process Model
rGaussPoisson Simulate Gauss-Poisson Process
Kest K-function
bronzefilter Bronze gradient filter data
marktable Tabulate Marks in Neighbourhood of Every Point in a Point Pattern
rmhmodel.default Build Point Process Model for Metropolis-Hastings Simulation.
applynbd Apply Function to Every Neighbourhood in a Point Pattern
matclust.estK Fit the Matern Cluster Point Process by Minimum Contrast
Extract.msr Extract Subset of Signed or Vector Measure
pppmatching Create a Point Matching
pixellate.ppp Convert Point Pattern to Pixel Image
Lcross.inhom Inhomogeneous Cross Type L Function
rStrauss Perfect Simulation of the Strauss Process
is.marked.ppm Test Whether A Point Process Model is Marked
pcfcross Multitype pair correlation function (cross-type)
shift Apply Vector Translation
nndist Nearest neighbour distances
union.quad Union of Data and Dummy Points
density.ppp Kernel Smoothed Intensity of Point Pattern
envelope Simulation Envelopes of Summary Function
spatstat-deprecated Deprecated spatstat functions
rpoispp3 Generate Poisson Point Pattern in Three Dimensions
print.im Print Brief Details of an Image
plot.msr Plot a Signed or Vector-Valued Measure
is.ppm Test Whether An Object Is A Fitted Point Process Model
midpoints.psp Midpoints of Line Segment Pattern
tess Create a Tessellation
rpoispp Generate Poisson Point Pattern
quadscheme Generate a Quadrature Scheme from a Point Pattern
Extract.quad Subset of Quadrature Scheme
Ord Generic Ord Interaction model
hamster Aherne's hamster tumour data
density.splitppp Kernel Smoothed Intensity of Split Point Pattern
incircle Find Largest Circle Inside Window
gridcentres Rectangular grid of points
rmhmodel.ppm Interpret Fitted Model for Metropolis-Hastings Simulation.
print.quad Print a Quadrature Scheme
dirichlet Dirichlet Tessellation of Point Pattern
summary.ppp Summary of a Point Pattern Dataset
is.empty Test Whether An Object Is Empty
F3est Empty Space Function of a Three-Dimensional Point Pattern
erosion Morphological Erosion
disc Circular Window
redwood California Redwoods Point Pattern (Ripley's Subset)
npoints Number of Points in a Point Pattern
thomas.estK Fit the Thomas Point Process by Minimum Contrast
smooth.msr Smooth a Signed or Vector-Valued Measure
clip.infline Intersect Infinite Straight Lines with a Window
finpines Pine saplings in Finland.
simplify.owin Approximate a Polygon by a Simpler Polygon
Kmulti Marked K-Function
rmhstart Determine Initial State for Metropolis-Hastings Simulation.
convexhull Convex Hull
allstats Calculate four standard summary functions of a point pattern.
hyperframe Hyper Data Frame
crossdist Pairwise distances
ppp Create a Point Pattern
rmh Simulate point patterns using the Metropolis-Hastings algorithm.
spatstat-package The Spatstat Package
trim.rectangle Cut margins from rectangle
lansing Lansing Woods Point Pattern
fasp.object Function Arrays for Spatial Patterns
unmark Remove Marks
Gfox Foxall's Distance Functions
rshift.splitppp Randomly Shift a List of Point Patterns
simdat Simulated Point Pattern
diameter Diameter of an Object
rmhmodel.list Define Point Process Model for Metropolis-Hastings Simulation.
Gcross Multitype Nearest Neighbour Distance Function (i-to-j)
markvario Mark Variogram
summary.listof Summary of a List of Things
superimposePSP Superimpose Several Line Segment Patterns
psp.object Class of Line Segment Patterns
progressreport Print Progress Reports
residualspaper Data and Code From JRSS Discussion Paper on Residuals
bei Tropical rain forest trees
methods.boxx Methods for Multi-Dimensional Box
rjitter Random Perturbation of a Point Pattern
centroid.owin Centroid of a window
matclust.estpcf Fit the Matern Cluster Point Process by Minimum Contrast Using Pair Correlation
simulate.ppm Simulate a Fitted Gibbs Point Process Model
effectfun Compute Fitted Effect of a Spatial Covariate in a Point Process Model
project2segment Move Point To Nearest Line
MultiHard The Multitype Hard Core Point Process Model
StraussHard The Strauss / Hard Core Point Process Model
Jdot Multitype J Function (i-to-any)
cells Biological Cells Point Pattern
rlabel Random Re-Labelling of Point Pattern
distfun Distance Map as a Function
betacells Beta Ganglion Cells in Cat Retina
periodify Make Periodic Copies of a Spatial Pattern
is.marked Test Whether Marks Are Present
miplot Morishita Index Plot
plot.quad plot a Spatial Quadrature Scheme
coords Extract or Change Coordinates of a Spatial or Spatiotemporal Point Pattern
pppdist Distance Between Two Point Patterns
markconnect Mark Connection Function
PairPiece The Piecewise Constant Pairwise Interaction Point Process Model
pcfcross.inhom Inhomogeneous Multitype Pair Correlation Function (Cross-Type)
lurking Lurking variable plot
ants Harkness-Isham ants' nests data
anova.slrm Analysis of Deviance for Spatial Logistic Regression Models
is.marked.ppp Test Whether A Point Pattern is Marked
rmh.ppm Simulate from a Fitted Point Process Model
owin.object Class owin
as.data.frame.hyperframe Coerce Hyperframe to Data Frame
im Create a Pixel Image Object
relrisk Nonparametric Estimate of Spatially-Varying Relative Risk
crossdist.default Pairwise distances between two different sets of points
thomas.estpcf Fit the Thomas Point Process by Minimum Contrast
as.ppp Convert Data To Class ppp
predict.kppm Prediction from a Fitted Cluster Point Process Model
istat Point and Click Interface for Exploratory Analysis of Point Pattern
infline Infinite Straight Lines
as.hyperframe.ppx Extract coordinates and marks of multidimensional point pattern
as.im Convert to Pixel Image
quad.ppm Extract Quadrature Scheme Used to Fit a Point Process Model
boxx Multi-Dimensional Box
affine.owin Apply Affine Transformation To Window
rescale Convert dataset to another unit of length
pixellate.psp Convert Line Segment Pattern to Pixel Image
discretise Safely Convert Point Pattern Window to Binary Mask
pairwise.family Pairwise Interaction Process Family
markcorr Mark Correlation Function
bind.fv Combine Function Value Tables
model.frame.ppm Extract the Environment of a Point Process Model
rshift Random Shift
plot.ppm plot a Fitted Point Process Model
as.data.frame.ppp Coerce Point Pattern to a Data Frame
quad.object Class of Quadrature Schemes
contour.im Contour plot of pixel image
rsyst Simulate systematic random point pattern
Kscaled Locally Scaled K-function
rotate.ppp Rotate a Point Pattern
is.multitype.ppp Test Whether A Point Pattern is Multitype
Kcross Multitype K Function (Cross-type)
bramblecanes Hutchings' Bramble Canes data
AreaInter The Area Interaction Point Process Model
identify.ppp Identify Points in a Point Pattern
chorley Chorley-Ribble Cancer Data
rMaternI Simulate Matern Model I
longleaf Longleaf Pines Point Pattern
diameter.boxx Geometrical Calculations for Multi-Dimensional Box
expand.owin Expand Window By Factor
plot.im Plot a Pixel Image
rpoisppx Generate Poisson Point Pattern in Any Dimensions
rMaternII Simulate Matern Model II
heather Diggle's Heather Data
box3 Three-Dimensional Box
nncross Nearest Neighbours Between Two Patterns
identify.psp Identify Segments in a Line Segment Pattern
gpc2owin Convert Polygonal Region into Different Format
lut Lookup Tables
km.rs Kaplan-Meier and Reduced Sample Estimator using Histograms
levelset Level Set of a Pixel Image
shapley Galaxies in the Shapley Supercluster
pcf.fv Pair Correlation Function obtained from K Function
unitname Name for Unit of Length
nsegments Number of Line Segments in a Line Segment Pattern
unique.ppp Extract Unique Points from a Spatial Point Pattern
append.psp Combine Two Line Segment Patterns
rThomas Simulate Thomas Process
plot.tess Plot a tessellation
rMatClust Simulate Matern Cluster Process
inforder.family Infinite Order Interaction Family
plot.owin Plot a Spatial Window
model.matrix.ppm Extract Design Matrix from Point Process Model
pixelquad Quadrature Scheme Based on Pixel Grid
reduced.sample Reduced Sample Estimator using Histogram Data
logLik.slrm Loglikelihood of Spatial Logistic Regression
superimpose Superimpose Several Point Patterns
Kcross.inhom Inhomogeneous Cross K Function
nnclean Nearest Neighbour Clutter Removal
setcov Set Covariance of a Window
nztrees New Zealand Trees Point Pattern
runifpoint3 Generate N Uniform Random Points in Three Dimensions
pp3 Three Dimensional Point Pattern
spatstat-internal Internal spatstat functions
pixellate.owin Convert Window to Pixel Image
predict.slrm Predicted or Fitted Values from Spatial Logistic Regression
solutionset Evaluate Logical Expression Involving Pixel Images and Return Region Where Expression is True
eval.im Evaluate Expression Involving Pixel Images
update.ppm Update a Fitted Point Process Model
qqplot.ppm Q-Q Plot of Residuals from Fitted Point Process Model
quadrat.test.splitppp Chi-Squared Test of CSR for Split Point Pattern
rthin Random Thinning
swedishpines Swedish Pines Point Pattern
ppm.object Class of Fitted Point Process Models
print.ppm Print a Fitted Point Process Model
selfcrossing.psp Crossing Points in a Line Segment Pattern
as.data.frame.psp Coerce Line Segment Pattern to a Data Frame
plot.hyperframe Plot Entries in a Hyperframe
predict.ppm Prediction from a Fitted Point Process Model
quadratcount Quadrat counting for a point pattern
bw.relrisk Cross Validated Bandwidth Selection for Relative Risk Estimation
fitted.slrm Fitted Probabilities for Spatial Logistic Regression
mean.im Maximum, Minimum, Mean, Median, Range or Sum of Pixel Values in an Image
compatible.fasp Test Whether Two Function Arrays Are Compatible
shift.psp Apply Vector Translation To Line Segment Pattern
quantile.im Sample Quantiles of Pixel Image
Gmulti Marked Nearest Neighbour Distance Function
rshift.ppp Randomly Shift a Point Pattern
default.dummy Generate a Default Pattern of Dummy Points
blur Apply Gaussian Blur to a Pixel Image
as.hyperframe Convert Data to Hyperframe
print.owin Print Brief Details of a Spatial Window
runifpointx Generate N Uniform Random Points in Any Dimensions
plot.kppm Plot a fitted cluster point process
pairdist.pp3 Pairwise distances in Three Dimensions
duplicated.ppp Determine Duplicated Points in a Spatial Point Pattern
Kmeasure Reduced Second Moment Measure
rescale.im Convert Pixel Image to Another Unit of Length
rmpoispp Generate Multitype Poisson Point Pattern
slrm Spatial Logistic Regression
nncorr Nearest-Neighbour Correlation Indices of Marked Point Pattern
border Border Region of a Window
psp Create a Line Segment Pattern
rotate.psp Rotate a Line Segment Pattern
vertices Vertices of a Window
rlinegrid Generate grid of parallel lines with random displacement
bounding.box.xy Convex Hull of Points
raster.x Cartesian Coordinates for a Pixel Raster
humberside Humberside Data on Childhood Leukaemia and Lymphoma
fv.object Data Frames of Function Values
runifdisc Generate N Uniform Random Points in a Disc
print.ppp Print Brief Details of a Point Pattern Dataset
nearestsegment Find Line Segment Nearest to Each Point
nndist.ppx Nearest Neighbour Distances in Any Dimensions
scanpp Read Point Pattern From Data File
split.im Divide Image Into Sub-images
rotate.owin Rotate a Window
crossing.psp Crossing Points of Two Line Segment Patterns
ppm Fit Point Process Model to Data
ppp.object Class of Point Patterns
Extract.psp Extract Subset of Line Segment Pattern
rmh.default Simulate Point Process Models using the Metropolis-Hastings Algorithm.
methods.ppx Methods for Multidimensional Space-Time Point Patterns
harmonic Basis for Harmonic Functions
plot.listof Plot a List of Things
shift.owin Apply Vector Translation To Window
distmap.owin Distance Map of Window
nnwhich.ppx Nearest Neighbours in Any Dimensions
smooth.ppp Spatial smoothing of observations at irregular points
summary.psp Summary of a Line Segment Pattern Dataset
rmhcontrol Set Control Parameters for Metropolis-Hastings Algorithm.
plot.plotppm Plot a plotppm Object Created by plot.ppm
varblock Estimate Variance of Summary Statistic by Subdivision
smooth.fv Apply Smoothing to Function Values
pairdist.default Pairwise distances
plot.fasp Plot a Function Array
rescue.rectangle Convert Window Back To Rectangle
methods.pp3 Methods for three-dimensional point patterns
interp.im Interpolate a Pixel Image
with.fv Evaluate an Expression in a Function Table
plot.fv Plot Function Values
split.ppp Divide Point Pattern into Sub-patterns
rMosaicField Mosaic Random Field
which.max.im Identify Pixelwise Maximum of Several Pixel Images
perimeter Perimeter Length of Window
vcov.ppm Variance-Covariance Matrix for a Fitted Point Process Model
summary.quad Summarizing a Quadrature Scheme
delaunay Delaunay Triangulation of Point Pattern
gridweights Compute Quadrature Weights Based on Grid Counts
as.mask Pixel Image Approximation of a Window
Extract.listof Extract or Replace Subset of a List of Things
as.psp Convert Data To Class psp
convexhull.xy Convex Hull of Points
Fest Estimate the empty space function F
adaptive.density Intensity Estimate of Point Pattern Using Tessellation
Gest Nearest Neighbour Distance Function G
Extract.fv Extract Subset of Function Values
bdist.tiles Distance to Boundary of Window
connected Connected components of an image or window
collapse.fv Collapse Several Function Tables into One
diameter.box3 Geometrical Calculations for Three-Dimensional Box
diameter.owin Diameter of a Window
as.mask.psp Convert Line Segment Pattern to Binary Pixel Mask
by.im Apply Function to Image Broken Down by Factor
Extract.fasp Extract Subset of Function Array
MultiStraussHard The Multitype/Hard Core Strauss Point Process Model
nnwhich Nearest neighbour
Extract.tess Extract or Replace Subset of Tessellation
Gdot Multitype Nearest Neighbour Distance Function (i-to-any)
as.matrix.im Convert Pixel Image to Matrix or Array
eval.fv Evaluate Expression Involving Functions
discpartarea Area of Part of Disc
copper Berman-Huntington points and lines data
amacrine Hughes' Amacrine Cell Data
pixellate Convert Spatial Object to Pixel Image
plot.bermantest Plot Result of Berman Test
localK Neighbourhood density function
ganglia Beta Ganglion Cells in Cat Retina, Old Version
fryplot Fry Plot of Point Pattern
plot.kstest Plot a Spatial Kolmogorov-Smirnov Test
inside.owin Test Whether Points Are Inside A Window
data.ppm Extract Original Data from a Fitted Point Process Model
plot.slrm Plot a Fitted Spatial Logistic Regression
as.tess Convert Data To Tessellation
rescale.ppp Convert Point Pattern to Another Unit of Length
mincontrast Method of Minimum Contrast
coef.ppm Coefficients of Fitted Point Process Model
Lcross Multitype L-function (cross-type)
methods.distfun Methods for Distance Functions
pcf.fasp Pair Correlation Function obtained from array of K functions
pppmatching.object Class of Point Matchings
rshift.psp Randomly Shift a Line Segment Pattern
quadrat.test Chi-Squared Dispersion Test for Spatial Point Pattern Based on Quadrat Counts
pcf Pair Correlation Function
summary.owin Summary of a Spatial Window
rotate Rotate
rSSI Simulate Simple Sequential Inhibition
cbind.hyperframe Combine Hyperframes by Rows or by Columns
urkiola Urkiola Woods Point Pattern
rknn Theoretical Distribution of Nearest Neighbour Distance
model.images Compute Images of Constructed Covariates
corners Corners of a rectangle
dummy.ppm Extract Dummy Points Used to Fit a Point Process Model
iplot Point and Click Interface for Displaying a Point Pattern
summary.splitppp Summary of a Split Point Pattern
nearest.raster.point Find Pixel Nearest to a Given Point
rpoisline Generate Poisson Random Line Process
runifpointOnLines Generate N Uniform Random Points On Line Segments
owin Create a Window
intersect.owin Intersection, Union or Set Subtraction of Two Windows
marks Marks of a Point Pattern
profilepl Profile Maximum Pseudolikelihood
quadrats Divide Region into Quadrats
plot.envelope Plot a Simulation Envelope
rpoint Generate N Random Points
pairdist Pairwise distances
spatstat.options Internal Options in Spatstat Package
reach Interaction Distance of a Point Process
simulate.kppm Simulate a Fitted Cluster Point Process Model
multiplicity.ppp Count Multiplicity of Duplicate Points
envelope.pp3 Simulation Envelopes of Summary Function for 3D Point Pattern
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Date 2011-04-25
License GPL (>= 2)
URL http://www.spatstat.org
Packaged 2011-03-25 05:20:01 UTC; adrian
Repository CRAN
Date/Publication 2011-03-26 15:45:24

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