spatstat v1.22-0

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by Adrian Baddeley

Spatial Point Pattern analysis, model-fitting, simulation, tests

A package for analysing spatial data, mainly Spatial Point Patterns, including multitype/marked points and spatial covariates, in any two-dimensional spatial region. Also supports three-dimensional point patterns, and space-time point patterns in any number of dimensions. Contains over 1000 functions for plotting spatial data, exploratory data analysis, model-fitting, simulation, spatial sampling, model diagnostics, and formal inference. Data types include point patterns, line segment patterns, spatial windows, pixel images and tessellations. Exploratory methods include K-functions, nearest neighbour distance and empty space statistics, Fry plots, pair correlation function, kernel smoothed intensity, relative risk estimation with cross-validated bandwidth selection, mark correlation functions, segregation indices, mark dependence diagnostics etc. Point process models can be fitted to point pattern data using functions ppm, kppm, slrm similar to glm. Models may include dependence on covariates, interpoint interaction, cluster formation and dependence on marks. Fitted models can be simulated automatically. Also provides facilities for formal inference (such as chi-squared tests) and model diagnostics (including simulation envelopes, residuals, residual plots and Q-Q plots).

Functions in spatstat

Name Description
smooth.msr Smooth a Signed or Vector-Valued Measure
suffstat Sufficient Statistic of Point Process Model
BadGey Hybrid Geyer Point Process Model
unmark Remove Marks
DiggleGatesStibbard Diggle-Gates-Stibbard Point Process Model
Gdot Multitype Nearest Neighbour Distance Function (i-to-any)
Kest.fft K-function using FFT
Pairwise Generic Pairwise Interaction model
collapse.fv Collapse Several Function Tables into One
crossdist Pairwise distances
density.splitppp Kernel Smoothed Intensity of Split Point Pattern
diameter Diameter of an Object
smooth.ppp Spatial smoothing of observations at irregular points
gridweights Compute Quadrature Weights Based on Grid Counts
im Create a Pixel Image Object
split.ppp Divide Point Pattern into Sub-patterns
with.fv Evaluate an Expression in a Function Table
logLik.slrm Loglikelihood of Spatial Logistic Regression
Emark Diagnostics for random marking
DiggleGratton Diggle-Gratton model
F3est Empty Space Function of a Three-Dimensional Point Pattern
closing Morphological Closing
longleaf Longleaf Pines Point Pattern
coef.ppm Coefficients of Fitted Point Process Model
pairdist.ppx Pairwise Distances in Any Dimensions
crossdist.ppp Pairwise distances between two different point patterns
Fiksel The Fiksel Interaction
G3est Nearest Neighbour Distance Distribution Function of a Three-Dimensional Point Pattern
sharpen Data Sharpening of Point Pattern
print.quad Print a Quadrature Scheme
PairPiece The Piecewise Constant Pairwise Interaction Point Process Model
bounding.box.xy Convex Hull of Points
relrisk Nonparametric Estimate of Spatially-Varying Relative Risk
rMosaicSet Mosaic Random Set
setcov Set Covariance of a Window
eem Exponential Energy Marks
chop.tess Subdivide a Window or Tessellation using a Set of Lines
distmap.psp Distance Map of Line Segment Pattern
shift.ppp Apply Vector Translation To Point Pattern
fitin.ppm Extract the Interaction from a Fitted Point Process Model
rmhmodel Define Point Process Model for Metropolis-Hastings Simulation.
rmhmodel.ppm Interpret Fitted Model for Metropolis-Hastings Simulation.
Gmulti Marked Nearest Neighbour Distance Function
is.im Test Whether An Object Is A Pixel Image
is.subset.owin Determine Whether One Window is Contained In Another
amacrine Hughes' Amacrine Cell Data
simplify.owin Approximate a Polygon by a Simpler Polygon
Iest Estimate the I-function
japanesepines Japanese Pines Point Pattern
applynbd Apply Function to Every Neighbourhood in a Point Pattern
split.im Divide Image Into Sub-images
as.rectangle Window Frame
nearest.raster.point Find Pixel Nearest to a Given Point
rpoint Generate N Random Points
shift.owin Apply Vector Translation To Window
summary.ppm Summarizing a Fitted Point Process Model
plot.linnet Plot a linear network
plot.fv Plot Function Values
solutionset Evaluate Logical Expression Involving Pixel Images and Return Region Where Expression is True
Kscaled Locally Scaled K-function
runiflpp Uniform Random Points on a Linear Network
tess Create a Tessellation
thomas.estK Fit the Thomas Point Process by Minimum Contrast
spatstat-package The Spatstat Package
summary.im Summarizing a Pixel Image
markvario Mark Variogram
progressreport Print Progress Reports
bw.relrisk Cross Validated Bandwidth Selection for Relative Risk Estimation
Gfox Foxall's Distance Functions
MultiStraussHard The Multitype/Hard Core Strauss Point Process Model
shift.psp Apply Vector Translation To Line Segment Pattern
project2segment Move Point To Nearest Line
methods.linnet Methods for Linear Networks
trim.rectangle Cut margins from rectangle
allstats Calculate four standard summary functions of a point pattern.
areaGain Difference of Disc Areas
which.max.im Identify Pixelwise Maximum of Several Pixel Images
methods.ppx Methods for Multidimensional Space-Time Point Patterns
Extract.listof Extract or Replace Subset of a List of Things
Extract.tess Extract or Replace Subset of Tessellation
ppm Fit Point Process Model to Data
connected Connected components of an image or window
diameter.boxx Geometrical Calculations for Multi-Dimensional Box
inforder.family Infinite Order Interaction Family
Kmulti Marked K-Function
data.ppm Extract Original Data from a Fitted Point Process Model
cut.ppp Classify Points in a Point Pattern
rThomas Simulate Thomas Process
Extract.fasp Extract Subset of Function Array
bdist.points Distance to Boundary of Window
lgcp.estK Fit a Log-Gaussian Cox Point Process by Minimum Contrast
redwoodfull California Redwoods Point Pattern (Entire Dataset)
centroid.owin Centroid of a window
localK Neighbourhood density function
whist Weighted Histogram
bind.fv Combine Function Value Tables
Extract.msr Extract Subset of Signed or Vector Measure
print.ppm Print a Fitted Point Process Model
as.data.frame.im Convert Pixel Image to Data Frame
Extract.quad Subset of Quadrature Scheme
Jest Estimate the J-function
Extract.psp Extract Subset of Line Segment Pattern
simulate.ppm Simulate a Fitted Gibbs Point Process Model
pairsat.family Saturated Pairwise Interaction Point Process Family
distfun Distance Map as a Function
copper Berman-Huntington points and lines data
fasp.object Function Arrays for Spatial Patterns
iplot Point and Click Interface for Displaying a Point Pattern
Jmulti Marked J Function
Extract.ppp Extract or Replace Subset of Point Pattern
cut.im Convert Pixel Image from Numeric to Factor
as.owin Convert Data To Class owin
blur Apply Gaussian Blur to a Pixel Image
discpartarea Area of Part of Disc
plot.colourmap Plot a Colour Map
psp.object Class of Line Segment Patterns
fitted.ppm Fitted Conditional Intensity for Point Process Model
summary.psp Summary of a Line Segment Pattern Dataset
Ord Generic Ord Interaction model
is.ppp Test Whether An Object Is A Point Pattern
is.marked Test Whether Marks Are Present
kppm Fit cluster point process model
Lcross.inhom Inhomogeneous Cross Type L Function
ants Harkness-Isham ants' nests data
adaptive.density Intensity Estimate of Point Pattern Using Tessellation
swedishpines Swedish Pines Point Pattern
bw.stoyan Stoyan's Rule of Thumb for Bandwidth Selection
shift Apply Vector Translation
dummy.ppm Extract Dummy Points Used to Fit a Point Process Model
superimpose Superimpose Several Geometric Patterns
is.owin Test Whether An Object Is A Window
Poisson Poisson Point Process Model
gridcentres Rectangular grid of points
summary.owin Summary of a Spatial Window
simulate.kppm Simulate a Fitted Cluster Point Process Model
summary.quad Summarizing a Quadrature Scheme
summary.ppp Summary of a Point Pattern Dataset
nnwhich.ppx Nearest Neighbours in Any Dimensions
bronzefilter Bronze gradient filter data
SatPiece Piecewise Constant Saturated Pairwise Interaction Point Process Model
anemones Beadlet Anemones Data
summary.splitppp Summary of a Split Point Pattern
eval.fv Evaluate Expression Involving Functions
affine.psp Apply Affine Transformation To Line Segment Pattern
gpc2owin Convert Polygonal Region into Different Format
distmap Distance Map
as.ppp Convert Data To Class ppp
envelope.pp3 Simulation Envelopes of Summary Function for 3D Point Pattern
nnwhich.pp3 Nearest neighbours in three dimensions
interp.im Interpolate a Pixel Image
markcorrint Mark Correlation Integral
harmonic Basis for Harmonic Functions
as.tess Convert Data To Tessellation
pixellate Convert Spatial Object to Pixel Image
im.object Class of Images
union.quad Union of Data and Dummy Points
Kinhom Inhomogeneous K-function
convexhull.xy Convex Hull of Points
clickppp Interactively Add Points
Geyer Geyer's Saturation Point Process Model
Lest L-function
clip.infline Intersect Infinite Straight Lines with a Window
spatstat-deprecated Deprecated spatstat functions
Replace.im Reset Values in Subset of Image
MultiHard The Multitype Hard Core Point Process Model
ewcdf Weighted Empirical Cumulative Distribution Function
LennardJones The Lennard-Jones Potential
plot.fasp Plot a Function Array
latest.news Print News About Latest Version of Package
rcell Simulate Baddeley-Silverman Cell Process
pcf.fasp Pair Correlation Function obtained from array of K functions
compatible.fasp Test Whether Two Function Arrays Are Compatible
as.data.frame.hyperframe Coerce Hyperframe to Data Frame
smooth.fv Apply Smoothing to Function Values
as.hyperframe.ppx Extract coordinates and marks of multidimensional point pattern
Lcross Multitype L-function (cross-type)
identify.ppp Identify Points in a Point Pattern
contour.im Contour plot of pixel image
as.mask.psp Convert Line Segment Pattern to Binary Pixel Mask
is.ppm Test Whether An Object Is A Fitted Point Process Model
print.owin Print Brief Details of a Spatial Window
border Border Region of a Window
print.ppp Print Brief Details of a Point Pattern Dataset
bdist.pixels Distance to Boundary of Window
coords Extract or Change Coordinates of a Spatial or Spatiotemporal Point Pattern
concatxy Concatenate x,y Coordinate Vectors
crossdist.ppx Pairwise Distances Between Two Different Multi-Dimensional Point Patterns
corners Corners of a rectangle
markstat Summarise Marks in Every Neighbourhood in a Point Pattern
clickpoly Interactively Define a Polygon
spatstat.options Internal Options in Spatstat Package
km.rs Kaplan-Meier and Reduced Sample Estimator using Histograms
convexhull Convex Hull
qqplot.ppm Q-Q Plot of Residuals from Fitted Point Process Model
nnwhich Nearest neighbour
density.psp Kernel Smoothing of Line Segment Pattern
nztrees New Zealand Trees Point Pattern
methods.lpp Methods for Point Patterns on a Linear Network
matclust.estK Fit the Matern Cluster Point Process by Minimum Contrast
rSSI Simulate Simple Sequential Inhibition
default.expand Compute Expansion Window for Simulation
varblock Estimate Variance of Summary Statistic by Subdivision
owin Create a Window
incircle Find Largest Circle Inside Window
discretise Safely Convert Point Pattern Window to Binary Mask
crossdist.default Pairwise distances between two different sets of points
infline Infinite Straight Lines
model.matrix.ppm Extract Design Matrix from Point Process Model
methods.boxx Methods for Multi-Dimensional Box
kaplan.meier Kaplan-Meier Estimator using Histogram Data
demopat Artificial Data Point Pattern
compatible.fv Test Whether Two Function Objects Are Compatible
density.ppp Kernel Smoothed Intensity of Point Pattern
integral.im Integral of a Pixel Image
plot.ppp plot a Spatial Point Pattern
is.multitype.ppm Test Whether A Point Process Model is Multitype
quadrat.test Chi-Squared Dispersion Test for Spatial Point Pattern Based on Quadrat Counts
vertices Vertices of a Window
diameter.owin Diameter of a Window
npoints Number of Points in a Point Pattern
Hardcore The Hard Core Point Process Model
selfcrossing.psp Crossing Points in a Line Segment Pattern
erosion Morphological Erosion
distmap.ppp Distance Map of Point Pattern
tile.areas Compute Areas of Tiles in a Tessellation
rescale Convert dataset to another unit of length
marktable Tabulate Marks in Neighbourhood of Every Point in a Point Pattern
finpines Pine saplings in Finland.
rotate.ppp Rotate a Point Pattern
plot.envelope Plot a Simulation Envelope
lurking Lurking variable plot
rMaternII Simulate Matern Model II
Kcross.inhom Inhomogeneous Cross K Function
scanpp Read Point Pattern From Data File
lpp Create Point Pattern on Linear Network
fv Create a Function Value Table
nbfires Point Patterns of New Brunswick Forest Fires
pcfdot.inhom Inhomogeneous Multitype Pair Correlation Function (Type-i-To-Any-Type)
crossdist.psp Pairwise distances between two different line segment patterns
fryplot Fry Plot of Point Pattern
is.marked.ppm Test Whether A Point Process Model is Marked
shift.im Apply Vector Translation To Pixel Image
alltypes Calculate Summary Statistic for All Types in a Multitype Point Pattern
volume Volume of an Object
plot.hyperframe Plot Entries in a Hyperframe
spatstat-internal Internal spatstat functions
ganglia Beta Ganglion Cells in Cat Retina, Old Version
spruces Spruces Point Pattern
quadrat.test.splitppp Chi-Squared Test of CSR for Split Point Pattern
pppmatching.object Class of Point Matchings
humberside Humberside Data on Childhood Leukaemia and Lymphoma
plot.ppm plot a Fitted Point Process Model
levelset Level Set of a Pixel Image
plot.im Plot a Pixel Image
msr Signed or Vector-Valued Measure
OrdThresh Ord's Interaction model
rMatClust Simulate Matern Cluster Process
reach Interaction Distance of a Point Process
Gest Nearest Neighbour Distance Function G
opening Morphological Opening
linnet Create a Linear Network
nndist.ppx Nearest Neighbour Distances in Any Dimensions
stieltjes Compute Integral of Function Against Cumulative Distribution
Jdot Multitype J Function (i-to-any)
plot.kstest Plot a Spatial Kolmogorov-Smirnov Test
lut Lookup Tables
quadratcount Quadrat counting for a point pattern
localpcf Local pair correlation function
area.owin Area of a Window
methods.pp3 Methods for three-dimensional point patterns
pairdist.default Pairwise distances
areaLoss Difference of Disc Areas
Extract.im Extract Subset of Image
summary.listof Summary of a List of Things
Kdot Multitype K Function (i-to-any)
Ldot Multitype L-function (i-to-any)
raster.x Cartesian Coordinates for a Pixel Raster
matclust.estpcf Fit the Matern Cluster Point Process by Minimum Contrast Using Pair Correlation
plot.listof Plot a List of Things
methods.box3 Methods for Three-Dimensional Box
quadscheme Generate a Quadrature Scheme from a Point Pattern
quad.ppm Extract Quadrature Scheme Used to Fit a Point Process Model
Kest K-function
reduced.sample Reduced Sample Estimator using Histogram Data
Kmeasure Reduced Second Moment Measure
nndist Nearest neighbour distances
pcf.ppp Pair Correlation Function of Point Pattern
residuals.ppm Residuals for Fitted Point Process Model
by.ppp Apply a Function to a Point Pattern Broken Down by Factor
square Square Window
nncross Nearest Neighbours Between Two Patterns
midpoints.psp Midpoints of Line Segment Pattern
rhohat Smoothing Estimate of Covariate Transformation
affine Apply Affine Transformation
heather Diggle's Heather Data
MultiStrauss The Multitype Strauss Point Process Model
rsyst Simulate systematic random point pattern
unique.ppp Extract Unique Points from a Spatial Point Pattern
Extract.splitppp Extract or Replace Sub-Patterns
murchison Murchison gold deposits
predict.kppm Prediction from a Fitted Cluster Point Process Model
nsegments Number of Line Segments in a Line Segment Pattern
nnclean Nearest Neighbour Clutter Removal
update.ppm Update a Fitted Point Process Model
boxx Multi-Dimensional Box
ppx Multidimensional Space-Time Point Pattern
StraussHard The Strauss / Hard Core Point Process Model
pppdist Distance Between Two Point Patterns
hist.im Histogram of Pixel Values in an Image
rpoislpp Poisson Point Process on a Linear Network
rpoispp3 Generate Poisson Point Pattern in Three Dimensions
pixellate.owin Convert Window to Pixel Image
rmh.default Simulate Point Process Models using the Metropolis-Hastings Algorithm.
quadratresample Resample a Point Pattern by Resampling Quadrats
identify.psp Identify Segments in a Line Segment Pattern
rshift.splitppp Randomly Shift a List of Point Patterns
letterR Window in Shape of Letter R
clarkevans Clark and Evans Aggregation Index
cells Biological Cells Point Pattern
cbind.hyperframe Combine Hyperframes by Rows or by Columns
update.kppm Update a Fitted Cluster Point Process Model
predict.ppm Prediction from a Fitted Point Process Model
anova.ppm ANOVA for Fitted Point Process Models
append.psp Combine Two Line Segment Patterns
affine.owin Apply Affine Transformation To Window
rGaussPoisson Simulate Gauss-Poisson Process
default.rmhcontrol Set Default Control Parameters for Metropolis-Hastings Algorithm.
rknn Theoretical Distribution of Nearest Neighbour Distance
urkiola Urkiola Woods Point Pattern
plot.slrm Plot a Fitted Spatial Logistic Regression
print.im Print Brief Details of an Image
Hest Spherical Contact Distribution Function
markconnect Mark Connection Function
is.marked.ppp Test Whether A Point Pattern is Marked
bramblecanes Hutchings' Bramble Canes data
ppp Create a Point Pattern
colourtools Convert and Compare Colours in Different Formats
profilepl Profile Maximum Pseudolikelihood
clickjoin Interactively join vertices on a plot
eval.im Evaluate Expression Involving Pixel Images
Saturated Saturated Pairwise Interaction model
delaunay Delaunay Triangulation of Point Pattern
rpoislinetess Poisson Line Tessellation
rlinegrid Generate grid of parallel lines with random displacement
plot.tess Plot a tessellation
coef.slrm Coefficients of Fitted Spatial Logistic Regression Model
marks Marks of a Point Pattern
quantile.im Sample Quantiles of Pixel Image
rmhmodel.list Define Point Process Model for Metropolis-Hastings Simulation.
dilation Morphological Dilation
dirichlet.weights Compute Quadrature Weights Based on Dirichlet Tessellation
rescale.ppp Convert Point Pattern to Another Unit of Length
rMaternI Simulate Matern Model I
miplot Morishita Index Plot
plot.psp plot a Spatial Line Segment Pattern
eval.fasp Evaluate Expression Involving Function Arrays
anova.slrm Analysis of Deviance for Spatial Logistic Regression Models
expand.owin Expand Window By Factor
as.data.frame.ppp Coerce Point Pattern to a Data Frame
nearestsegment Find Line Segment Nearest to Each Point
is.multitype.ppp Test Whether A Point Pattern is Multitype
owin.object Class owin
pcf.fv Pair Correlation Function obtained from K Function
runifpoint3 Generate N Uniform Random Points in Three Dimensions
pixellate.psp Convert Line Segment Pattern to Pixel Image
rshift.psp Randomly Shift a Line Segment Pattern
rmhstart Determine Initial State for Metropolis-Hastings Simulation.
bei Tropical rain forest trees
ripras Estimate window from points alone
rmpoispp Generate Multitype Poisson Point Pattern
print.psp Print Brief Details of a Line Segment Pattern Dataset
fv.object Data Frames of Function Values
plot.plotppm Plot a plotppm Object Created by plot.ppm
as.hyperframe Convert Data to Hyperframe
plot.owin Plot a Spatial Window
hyperframe Hyper Data Frame
is.multitype Test whether Object is Multitype
bounding.box Bounding Box of a Window or Point Pattern
nndist.psp Nearest neighbour distances between line segments
rshift.ppp Randomly Shift a Point Pattern
rescale.psp Convert Line Segment Pattern to Another Unit of Length
is.convex Test Whether a Window is Convex
pairdist Pairwise distances
markcorr Mark Correlation Function
lgcp.estpcf Fit a Log-Gaussian Cox Point Process by Minimum Contrast
plot.quad plot a Spatial Quadrature Scheme
by.im Apply Function to Image Broken Down by Factor
rStrauss Perfect Simulation of the Strauss Process
pairdist.pp3 Pairwise distances in Three Dimensions
rmhcontrol Set Control Parameters for Metropolis-Hastings Algorithm.
pairs.im Scatterplot Matrix for Pixel Images
as.box3 Convert Data to Three-Dimensional Box
crossdist.pp3 Pairwise distances between two different three-dimensional point patterns
is.empty Test Whether An Object Is Empty
Strauss The Strauss Point Process Model
slrm Spatial Logistic Regression
as.psp Convert Data To Class psp
pcf3est Pair Correlation Function of a Three-Dimensional Point Pattern
dirichlet Dirichlet Tessellation of Point Pattern
plot.bermantest Plot Result of Berman Test
endpoints.psp Endpoints of Line Segment Pattern
pairdist.psp Pairwise distances between line segments
pcf Pair Correlation Function
pppmatching Create a Point Matching
pcfcross.inhom Inhomogeneous Multitype Pair Correlation Function (Cross-Type)
plot.pp3 Plot a three-dimensional point pattern
circumradius Circumradius and Diameter of a Linear Network
pixellate.ppp Convert Point Pattern to Pixel Image
rescale.owin Convert Window to Another Unit of Length
bdist.tiles Distance to Boundary of Window
intersect.owin Intersection, Union or Set Subtraction of Two Windows
intersect.tess Intersection of Two Tessellations
plot.splitppp Plot a List of Point Patterns
fitted.slrm Fitted Probabilities for Spatial Logistic Regression
diagnose.ppm Diagnostic Plots for Fitted Point Process Model
hamster Aherne's hamster tumour data
rjitter Random Perturbation of a Point Pattern
rotate Rotate
ppm.object Class of Fitted Point Process Models
model.frame.ppm Extract the Environment of a Point Process Model
logLik.ppm Log Likelihood for Poisson Point Process Model
effectfun Compute Fitted Effect of a Spatial Covariate in a Point Process Model
quadrats Divide Region into Quadrats
rpoispp Generate Poisson Point Pattern
rmh Simulate point patterns using the Metropolis-Hastings algorithm.
rpoisline Generate Poisson Random Line Process
osteo Osteocyte Lacunae Data: Replicated Three-Dimensional Point Patterns
matchingdist Distance for a Point Pattern Matching
rpoisppx Generate Poisson Point Pattern in Any Dimensions
runifdisc Generate N Uniform Random Points in a Disc
pcfcross Multitype pair correlation function (cross-type)
methods.distfun Methods for Distance Functions
rmhmodel.default Build Point Process Model for Metropolis-Hastings Simulation.
persp.im Perspective Plot of Pixel Image
nndist.pp3 Nearest neighbour distances in three dimensions
rlabel Random Re-Labelling of Point Pattern
mean.im Maximum, Minimum, Mean, Median, Range or Sum of Pixel Values in an Image
pcfdot Multitype pair correlation function (i-to-any)
plot.msr Plot a Signed or Vector-Valued Measure
plot.kppm Plot a fitted cluster point process
pp3 Three Dimensional Point Pattern
unitname Name for Unit of Length
predict.slrm Predicted or Fitted Values from Spatial Logistic Regression
Fest Estimate the empty space function F
runifpointx Generate N Uniform Random Points in Any Dimensions
Jcross Multitype J Function (i-to-j)
Ldot.inhom Inhomogeneous Multitype L Dot Function
Linhom L-function
as.data.frame.psp Coerce Line Segment Pattern to a Data Frame
chorley Chorley-Ribble Cancer Data
bermantest Berman's Tests for Point Process Model
Kdot.inhom Inhomogeneous Multitype K Dot Function
colourmap Colour Lookup Tables
betacells Beta Ganglion Cells in Cat Retina
dilated.areas Areas of Morphological Dilations
disc Circular Window
distmap.owin Distance Map of Window
inside.owin Test Whether Points Are Inside A Window
kstest.ppm Kolmogorov-Smirnov Test for Point Process Model
lengths.psp Lengths of Line Segments
simdat Simulated Point Pattern
simplenet Simple Example of Linear Network
istat Point and Click Interface for Exploratory Analysis of Point Pattern
thomas.estpcf Fit the Thomas Point Process by Minimum Contrast
multiplicity.ppp Count Multiplicity of Duplicate Points
vcov.ppm Variance-Covariance Matrix for a Fitted Point Process Model
nncorr Nearest-Neighbour Correlation Indices of Marked Point Pattern
with.hyperframe Evaluate an Expression in Each Row of a Hyperframe
Softcore The Soft Core Point Process Model
box3 Three-Dimensional Box
angles.psp Orientation Angles of Line Segments
pairwise.family Pairwise Interaction Process Family
periodify Make Periodic Copies of a Spatial Pattern
compatible.im Test Whether Two Pixel Images Are Compatible
pixelquad Quadrature Scheme Based on Pixel Grid
pcfinhom Inhomogeneous Pair Correlation Function
complement.owin Take Complement of a Window
envelope Simulation Envelopes of Summary Function
duplicated.ppp Determine Duplicated Points in a Spatial Point Pattern
eroded.areas Areas of Morphological Erosions
pointsOnLines Place Points Evenly Along Specified Lines
rNeymanScott Simulate Neyman-Scott Process
rescue.rectangle Convert Window Back To Rectangle
rshift Random Shift
marks.psp Marks of a Line Segment Pattern
mincontrast Method of Minimum Contrast
model.images Compute Images of Constructed Covariates
ord.family Ord Interaction Process Family
shapley Galaxies in the Shapley Supercluster
pairdist.ppp Pairwise distances
spokes Spokes pattern of dummy points
tiles Extract List of Tiles in a Tessellation
Extract.fv Extract Subset of Function Values
AreaInter The Area Interaction Point Process Model
Gcross Multitype Nearest Neighbour Distance Function (i-to-j)
Kcross Multitype K Function (Cross-type)
affine.ppp Apply Affine Transformation To Point Pattern
K3est K-function of a Three-Dimensional Point Pattern
as.im Convert to Pixel Image
as.mask Pixel Image Approximation of a Window
as.matrix.im Convert Pixel Image to Matrix or Array
as.polygonal Convert a Window to a Polygonal Window
clarkevans.test Clark and Evans Test
default.dummy Generate a Default Pattern of Dummy Points
crossing.psp Crossing Points of Two Line Segment Patterns
ponderosa Ponderosa Pine Tree Point Pattern
redwood California Redwoods Point Pattern (Ripley's Subset)
residualspaper Data and Code From JRSS Discussion Paper on Residuals
diameter.box3 Geometrical Calculations for Three-Dimensional Box
deltametric Delta Metric
lansing Lansing Woods Point Pattern
rotate.psp Rotate a Line Segment Pattern
perimeter Perimeter Length of Window
ppp.object Class of Point Patterns
psp Create a Line Segment Pattern
rthin Random Thinning
quad.object Class of Quadrature Schemes
rMosaicField Mosaic Random Field
rmh.ppm Simulate from a Fitted Point Process Model
rmpoint Generate N Random Multitype Points
rstrat Simulate Stratified Random Point Pattern
rotate.owin Rotate a Window
rpoisppOnLines Generate Poisson Point Pattern on Line Segments
runifpointOnLines Generate N Uniform Random Points On Line Segments
runifpoint Generate N Uniform Random Points
rescale.im Convert Pixel Image to Another Unit of Length
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Date 2011-04-28
License GPL (>= 2)
URL http://www.spatstat.org
Packaged 2011-04-28 02:13:32 UTC; adrian
Repository CRAN
Date/Publication 2011-04-28 08:30:09

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