read_tax_example

Access the files in speedyseq's inst/extdata sub-directory

Import classification results from the 'RDP Classifier' (Ribosomal Database Project),' 'USEARCH sintax,' 'vsearch sintax' and the 'QIIME2' (Quantitative Insights into Microbial Ecology) classifiers into 'phyloseq' tax_table objects.

John Quensen

speedytax

Rapidly Import Classifier Results into 'phyloseq'

read_tax_example function

<dl><dt>file</dt>
<dd>Name of file to return.</dd></dl>

Arguments

Get path to example taxonomy files — read_tax_example

<dl>

<dt>file</dt>
<dd>Name of file to return.</dd>

</dl>

read_tax_example: Get path to example taxonomy files

Description

Usage

Value

Arguments

Examples