sarkar

<p>A set of 8 dummy sequences published in Sarkar et al 2008 to illustrate the
different categories of diagnostic nucleotides.</p>

datasets

Analysis of species limits and DNA barcoding data. Included are functions for generating important summary statistics from DNA barcode data, assessing specimen identification efficacy, testing and optimizing divergence threshold limits, assessment of diagnostic nucleotides, and calculation of the probability of reciprocal monophyly. Additionally, a sliding window function offers opportunities to analyse information across a gene, often used for marker design in degraded DNA studies. Further information on the package has been published in Brown et al (2012) <doi:10.1111/j.1755-0998.2011.03108.x>.

Rupert Collins

spider

Species Identity and Evolution in R

sarkar function

<p>A DNAbin object containing 8 sequences with a length of 18 base
pairs stored as a matrix.</p>

sarkar: Dummy sequences illustrating the categories of diagnostic nucleotides

Description

Arguments

Format