woodmouse

This is a set of 15 sequences of the mitochondrial gene cytochrome
b of the woodmouse (Apodemus sylvaticus) which is a
subset of the data analysed by Michaux et al. (2003). The full data
set is available through GenBank (accession numbers AJ511877 to
AJ511987). Dataset from the ape package.

datasets

Analysis of species limits and DNA barcoding data. Included are functions for generating important summary statistics from DNA barcode data, assessing specimen identification efficacy, testing and optimizing divergence threshold limits, assessment of diagnostic nucleotides, and calculation of the probability of reciprocal monophyly. Additionally, a sliding window function offers opportunities to analyse information across a gene, often used for marker design in degraded DNA studies. Further information on the package has been published in Brown et al (2012) <doi:10.1111/j.1755-0998.2011.03108.x>.

Rupert Collins

spider

Species Identity and Evolution in R

woodmouse function

A DNAbin object containing 8 sequences with a length of 18 base
pairs stored as a matrix.

woodmouse: Cytochrome b Gene Sequences of Woodmice

Description

Arguments

Format