spiral_initialize_by_gcoor

Initialize the spiral with genomic coordinates

It visualizes data along an Archimedean spiral <https://en.wikipedia.org/wiki/Archimedean_spiral>, makes so-called spiral graph or spiral chart.
It has two major advantages for visualization: 1. It is able to visualize data with very long axis with high
resolution. 2. It is efficient for time series data to reveal periodic patterns.

Zuguang Gu

spiralize

Visualize Data on Spirals

spiral_initialize_by_gcoor function

<dl>
 <dt>xlim</dt>
<dd>Range of the genomic coordinates.</dd> <dt>scale_by</dt>
<dd>For genomic plot, axis is linearly scaled by the curve length.</dd> <dt>...</dt>
<dd>All pass to <code>spiral_initialize</code>.</dd>
</dl>

Arguments

Initialize the spiral with genomic coordinates — spiral_initialize_by_gcoor

<dl>


 <dt>xlim</dt>
<dd>Range of the genomic coordinates.</dd>

 <dt>scale_by</dt>
<dd>For genomic plot, axis is linearly scaled by the curve length.</dd>

 <dt>...</dt>
<dd>All pass to <code>spiral_initialize</code>.</dd>


</dl>

spiral_initialize_by_gcoor: Initialize the spiral with genomic coordinates

Description

Usage

Value

Arguments

Details

Examples