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spm12r (version 2.0)

spm12_realign_est: SPM12 Realign (Estimate)

Description

Performs SPM12 Realignment estimation on an Image

Usage

spm12_realign_est(filename, fwhm = 5, register_to = c("first", "mean"), add_spm_dir = TRUE, spmdir = spm_dir(), clean = TRUE, verbose = TRUE, outdir = NULL, ...)

Arguments

filename
Files to be realigned
fwhm
Full-Width Half Max to smooth
register_to
Should the files be registered to the first or the mean
add_spm_dir
Add SPM12 directory from this package
spmdir
SPM dir to add, will use package default directory
clean
Remove scripts from temporary directory after running
verbose
Print diagnostic messages
outdir
Directory to copy results. If full filename given, then results will be in dirname(filename)
...
Arguments passed to run_spm12_script

Value

Character list of filenames from output