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spocc (version 0.4.0)

Interface to Species Occurrence Data Sources

Description

A programmatic interface to many species occurrence data sources, including 'GBIF', 'USGS's' 'BISON', 'iNaturalist', Berkeley 'Ecoinformatics' Engine 'eBird', 'AntWeb', and `iDigBio`. Includes functionality for retrieving species occurrence data, and combining that data.

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Install

install.packages('spocc')

Monthly Downloads

16,500

Version

0.4.0

License

MIT + file LICENSE

Issues

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Repository

https://github.com/ropensci/spocc

Maintainer

Scott Chamberlain

Last Published

October 2nd, 2015

Functions in spocc (0.4.0)

Search for species names across many data sources.

Get more data on individual occurrences.

Automatically generate coverages for a spocc search

Convert a bounding box to a Well Known Text polygon, and a WKT to a bounding box

Coerce occurrence keys to antwebkey/occkey objects

Coerce occurrence keys to idigbio uuid objects

Coerce occurrence keys to bisonkey/occkey objects

Change names to be the same for each taxon.

Coerce occurrence keys to vertnetkey/occkey objects

Coerce occurrence keys to ecoenginekey/occkey objects

Coerce occurrence keys to iNaturalist id objects

R interface to many species occurrence data sources

Look up options for parameters passed to each source

occ_names_options

Look up options for parameters passed to each source for occ_names function

spocc objects and their print, plot, and summary methods

Capitalize the first letter of a character string.

Search for species occurrence data across many data sources.

spocc_colClasses

Coerces data.frame columns to the specified classes

Read or write WKT

Coerce occurrence keys to gbifkey/occkey objects

Visualize well-known text area's on a map.

Combine results from occ calls to a single data.frame

spocc_duplicates

A note about duplicate occurrence records