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spocc (version 0.4.4)

Interface to Species Occurrence Data Sources

Description

A programmatic interface to many species occurrence data sources, including 'GBIF', 'USGS's' 'BISON', 'iNaturalist', Berkeley 'Ecoinformatics' Engine 'eBird', 'AntWeb', and 'iDigBio'. Includes functionality for retrieving species occurrence data, and combining that data.

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Install

install.packages('spocc')

Monthly Downloads

17,039

Version

0.4.4

License

MIT + file LICENSE

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Maintainer

Scott Chamberlain

Last Published

January 22nd, 2016

Functions in spocc (0.4.4)

as.gbif

Coerce occurrence keys to gbifkey/occkey objects
as.idigbio

Coerce occurrence keys to idigbio uuid objects
occ_coverage

Automatically generate coverages for a spocc search
inspect

Get more data on individual occurrences.
bbox2wkt

Convert a bounding box to a Well Known Text polygon, and a WKT to a bounding box
as.bison

Coerce occurrence keys to bisonkey/occkey objects
as.antweb

Coerce occurrence keys to antwebkey/occkey objects
as.inat

Coerce occurrence keys to iNaturalist id objects
occ_names_options

Look up options for parameters passed to each source for occ_names function
spocc_capwords

Capitalize the first letter of a character string.
as.vertnet

Coerce occurrence keys to vertnetkey/occkey objects
wkt

Read or write WKT
spocc_colClasses

Coerces data.frame columns to the specified classes
occ_names

Search for species names across many data sources.
spocc_type_sum

Type summary
occ_options

Look up options for parameters passed to each source
spocc-package

Interface to many species occurrence data sources
occ2df

Combine results from occ calls to a single data.frame
spocc_objects

spocc objects and their print, plot, and summary methods
wkt_vis

Visualize well-known text area's on a map.
spocc_duplicates

A note about duplicate occurrence records
as.ecoengine

Coerce occurrence keys to ecoenginekey/occkey objects
occ

Search for species occurrence data across many data sources.
fixnames

Change names to be the same for each taxon.