spocc (version 0.4.5)

as.vertnet: Coerce occurrence keys to vertnetkey/occkey objects

Description

Coerce occurrence keys to vertnetkey/occkey objects

Usage

as.vertnet(x)

Arguments

x

Various inputs, including the output from a call to occ (class occdat), occ2df (class data.frame), or a list, numeric, character, vertnetkey, or occkey.

Value

• One or more in a list of both class vertnetkey and occkey

Details

Internally, we use vert_id, whereas occ uses vertsearch.

Examples

spnames <- c('Accipiter striatus', 'Setophaga caerulescens', 'Carduelis tristis')
out <- occ(query=spnames, from='vertnet', has_coords=TRUE, limit=2)
res <- occ2df(out)
(tt <- as.vertnet(out))
(uu <- as.vertnet(res))
keys <- Filter(Negate(is.na), res$key)
as.vertnet(keys[1])
as.vertnet(as.list(keys[1:2]))
as.vertnet(tt[[1]])
as.vertnet(uu[[1]])
as.vertnet(tt[1:2])