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spocc (version 0.5.0)

Interface to Species Occurrence Data Sources

Description

A programmatic interface to many species occurrence data sources, including 'GBIF', 'USGS's' 'BISON', 'iNaturalist', Berkeley 'Ecoinformatics' Engine 'eBird', 'AntWeb', and 'iDigBio'. Includes functionality for retrieving species occurrence data, and combining that data.

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Install

install.packages('spocc')

Monthly Downloads

3,649

Version

0.5.0

License

MIT + file LICENSE

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Repository

https://github.com/ropensci/spocc

Maintainer

Scott Chamberlain

Last Published

April 23rd, 2016

Functions in spocc (0.5.0)

Coerce occurrence keys to bisonkey/occkey objects

Coerce occurrence keys to ecoenginekey/occkey objects

Coerce occurrence keys to iNaturalist id objects

Coerce occurrence keys to antwebkey/occkey objects

Coerce occurrence keys to vertnetkey/occkey objects

Get more data on individual occurrences.

Coerce occurrence keys to gbifkey/occkey objects

Search for species occurrence data across many data sources.

spocc_duplicates

A note about duplicate occurrence records

Convert a bounding box to a Well Known Text polygon, and a WKT to a bounding box

Coerce occurrence keys to idigbio uuid objects

Visualize well-known text area's on a map.

Interface to many species occurrence data sources

Change names to be the same for each taxon.

Read or write WKT

occ_names_options

Look up options for parameters passed to each source for occ_names function

Capitalize the first letter of a character string.

Combine results from occ calls to a single data.frame

spocc_colClasses

Coerces data.frame columns to the specified classes

Automatically generate coverages for a spocc search

spocc objects and their print, plot, and summary methods

Look up options for parameters passed to each source

Search for species names across many data sources.