spots (version 0.1.0)

LoadData: Load selected data

Description

If not previously run, it will download the selected data.

Usage

LoadData(file.path, data.use = c("Visium.HNN", "Visium.Brain"))

Arguments

file.path

Path to the directory contains or to download the data object, i.e. "~/Downloads".

data.use

Selected data to load. See available.data.

• Visium.HNN, hexagonal nearest neighbor distance matrix of 10x Visium 4992 whitelist spatial barcodes.

• Visium.Brain, sample 10x Visium Sagittal-Posterior Mouse Brain data with 3353 spatial barcodes and 2000 highly variable genes, load as a Seurat object.

Value

Selected data:

Examples

# NOT RUN {
Visium.hnn.dist <- LoadData("~/Downloads", "Visium.HNN")
# }
# NOT RUN {
# }