phamming.distance

data

results will be stored here as binary data

output_filename

Calculates the hamming distance matrix between a set of DNA
  sequences provided as a ShortReadQ or DNAStringSet objects.

utilities

interface

SPRINT (Simple Parallel R INTerface) is a parallel
        framework for R. It provides a High Performance Computing (HPC)
        harness which allow R scripts to run on HPC clusters. SPRINT
        contains a library of selected R functions that have been
        parallelized. Functions are named after the original R function
        with the added prefix 'p', i.e. the parallel version of cor()
        in SPRINT is called pcor(). Call to the parallel R functions
        are included directly in standard R scripts.

phamming.distance: Parallel hamming distance

Description

Usage

Arguments

Details