coords_df_sim

<p>A data frame with 3 columns. Columns 1-2 give spot coordinates. Column 3 gives simulated ground truth labels.</p>

datasets

Allows for identification of cell sub-populations within tissue samples using
Bayesian multivariate mixture models with spatial random effects to account for a wide range of
spatial gene expression patterns, as described in Allen et. al, 2021 <doi:10.1101/2021.06.23.449615>.
Bayesian inference is conducted using efficient Gibbs sampling implemented using 'Rcpp'.

Carter Allen

spruce

Spatial Random Effects Clustering of Single Cell Data

Dongjun Chung

coords_df_sim function

Format

stx Mouse brain coordinates — coords_df_sim

stx Mouse brain coordinates

coords_df_sim: stx Mouse brain coordinates

Description

Usage

Arguments

Format