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spuRs (version 2.0.0)

Functions and Datasets for "Introduction to Scientific Programming and Simulation Using R".

Description

This package provides functions and datasets from the book "Introduction to Scientific Programming and Simulation Using R".

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Version

Install

install.packages('spuRs')

Monthly Downloads

242

Version

2.0.0

License

GPL-3

Maintainer

Andrew Robinson

Last Published

July 24th, 2014

Functions in spuRs (2.0.0)

mean.transectHolder

Function to compute the mean dispersal distance along a transect of seed traps.
RK4adapt

A function which uses the Fourth order Runge-Kutta method with adaptive step size to solve a system of ODE's.
prime

Function to assess whether or not an integer is prime.
newtonraphson

A function of the Newton-Raphson algorithm.
MCEstimation

A function to estimate the transition matrix for a discrete time Markov chain.
sd.transectHolder

Function to compute the sd dispersal distance along a transect of seed traps.
simulate.transectHolder

Function to simulate a modelled seed rain from a transectHolder
spuRs-package

"Introduction to Scientific Programming and Simulation Using R."
booking_clerkMC

A function to simulate the harassed booking clerk Markov chain.
kew

303 years of monthly rainfall data from Kew Gardens, London, U.K.
mean.trapTransect

Function to compute the mean dispersal distance along a transect of seed traps.
ufc

Upper Flat Creek forest cruise tree data
trapTransect

Function to construct an object representing a transect of seedtraps.
fixedpoint_show

A function of the fixed point algorithm.
vol.m3

Function to compute the volume of a tree bole assuming a particular shape.
fixedpoint

A function of the fixed point algorithm.
print.transectHolder

Function to print a transectHolder object usefullly.
ufc.plots

Upper Flat Creek forest cruise plot data
trees

von Guttenberg Norway spruce tree measurement data
print.trapTransect

Function to print a trapTransect object usefullly.
transectHolder

Function to construct an object representing a collection of trapTransect objects.
newtonraphson_show

A function of the Newton-Raphson algorithm, plotting the path.
CMCSimulation

A function to simulate a continuous time Markov chain.
fitDistances

Function to fit a model to seed transect distance/count data.
MCSimulation

A function to simulate a discrete time Markov chain.
primesieve

Function to identify all the primes in a vector of positive integers.
treeg

Grand fir tree growth data from northern and central Idaho, USA.
bisection

A function of the bisection algorithm.