Nonparametric empirical Bayes classifier without annotations; training
Nonparametric empirical Bayes classifier using latent annotations: binary indicators; training
Logit function
Latent dependency detection
Nonparametric false simultaneous discovery rate control, two thresholds
Max test for detecting simultaneous signals
Nonparametric empirical Bayes classifier using latent annotations: chi-square test statistics and binary indicators; prediction
Nonparametric false simultaneous discovery rate control, two thresholds -- report all thresholds
Polygenic risk score; prediction
Nonparametric empirical Bayes classifier using latent annotations: chi-square test statistics and binary indicators; training
Polygenic risk score; prediction for classifier trained with CV
Nonparametric empirical Bayes classifier without annotations; prediction
Nonparametric empirical Bayes classifier using latent annotations: chi-square test statistics; training
Nonparametric empirical Bayes classifier using latent annotations: chi-square test statistics; prediction
Nonparametric empirical Bayes classifier using latent annotations: wrapper function; predict
Trivariate NPMLE
Polygenic risk score (given only allele frequencies); training with CV
Polygenic risk score (given only allele frequencies); training
Univariate NPMLE
Nonparametric empirical Bayes classifier using latent annotations: wrapper function; training
Nonparametric false simultaneous discovery rate control
Nonparametric empirical Bayes classifier using latent annotations: binary indicators; prediction
Bivariate NPMLE
Expit function