base_cdf

<code>base_cdf</code> plots an empirical cdf of the toxicity values against one or
several fitted distributions' cdf. It works for both censored and non
censored data.

Web application using 'shiny' for the SSD (Species
Sensitivity Distribution) module of the MOSAIC (MOdeling and
StAtistical tools for ecotoxICology) platform. It estimates the
Hazardous Concentration for x% of the species (HCx) from toxicity
values that can be censored and provides various plotting options for
a better understanding of the results. See our companion paper
Kon Kam King et al. (2014) <doi:10.48550/arXiv.1311.5772>.

Aurélie Siberchicot

ssd4mosaic

Web Application for the SSD Module of the MOSAIC Platform

Milena Kaag

Sandrine Charles

UMR5558 LBBE MEPS 

rhandsontable contributors 

base_cdf function

<dl><dt>fits</dt>
<dd>A list of fits of class <code>fitdist</code> or <code>fitdistcens</code>
computed from the same toxicity data.</dd>
<dt>unit</dt>
<dd>A character vector, the unit of the toxicity data</dd>
<dt>logscale</dt>
<dd>if <code>TRUE</code>, uses a logarithmic scale for the \(x\)-axis</dd>
<dt>names</dt>
<dd>Label vector for data points (only for non censored data)</dd>
<dt>horizontals</dt>
<dd>If <code>TRUE</code>, draws horizontal lines for the step empirical 
 cumulative distribution function (ecdf). See also <code><a href="/link/plot.stepfun?package=ssd4mosaic&version=1.0.3" data-mini-rdoc="ssd4mosaic::plot.stepfun">plot.stepfun</a></code>.</dd>
<dt>xlim</dt>
<dd>The \(x\)-limits of the plot.</dd></dl>

Arguments

Graphical representation of fitted distribution(s) — base_cdf

<dl>

<dt>fits</dt>
<dd>A list of fits of class <code>fitdist</code> or <code>fitdistcens</code>
computed from the same toxicity data.</dd>


<dt>unit</dt>
<dd>A character vector, the unit of the toxicity data</dd>


<dt>logscale</dt>
<dd>if <code>TRUE</code>, uses a logarithmic scale for the \(x\)-axis</dd>


<dt>names</dt>
<dd>Label vector for data points (only for non censored data)</dd>


<dt>horizontals</dt>
<dd>If <code>TRUE</code>, draws horizontal lines for the step empirical 
 cumulative distribution function (ecdf). See also <code><a href='https://rdrr.io/r/stats/plot.stepfun.html'>plot.stepfun</a></code>.</dd>


<dt>xlim</dt>
<dd>The \(x\)-limits of the plot.</dd>

</dl>

base_cdf: Graphical representation of fitted distribution(s)

Description

Usage

Value

Arguments