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ssizeRNA (version 1.1.1)

Sample Size Calculation for RNA-Seq Data

Description

We propose a procedure for sample size calculation while controlling false discovery rate for RNA-seq experimental design. Our procedure depends on the Voom method proposed for RNA-seq data analysis by Law et al. (2014) and the sample size calculation method proposed for microarray experiments by Liu and Hwang (2007). We develop a set of functions that calculates appropriate sample sizes for two-sample t-test for RNA-seq experiments with fixed or varied set of parameters. The outputs also contain a plot of power versus sample size, a table of power at different sample sizes, and a table of critical test values at different sample sizes.

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install.packages('ssizeRNA')

Monthly Downloads

248

Version

1.1.1

License

GPL (>= 2)

Maintainer

Last Published

April 30th, 2015

Functions in ssizeRNA (1.1.1)