eempf_cortable

Calculating correlations between the component loadings in all samples (C-Modes).

This is a user-friendly way to run a parallel factor (PARAFAC) analysis (Harshman, 1971) <doi:10.1121/1.1977523> on excitation emission matrix (EEM) data from dissolved organic matter (DOM) samples (Murphy et al., 2013) <doi:10.1039/c3ay41160e>. The analysis includes profound methods for model validation. Some additional functions allow the calculation of absorbance slope parameters and create beautiful plots.

Matthias Pucher

staRdom

PARAFAC Analysis of EEMs from DOM

Daniel Graeber

Stefan Preiner

Renata Pinto

eempf_cortable function

<dl><dt>pfmodel</dt>
<dd>results from a PARAFAC analysis, class parafac</dd>
<dt>normalisation</dt>
<dd>logical, whether normalisation is undone or not</dd>
<dt>method</dt>
<dd>method of correlation, passed to <code><a href="/link/cor?package=staRdom&version=1.1.28" data-mini-rdoc="staRdom::cor">cor</a></code></dd>
<dt>...</dt>
<dd>passed on to <code><a href="/link/cor?package=staRdom&version=1.1.28" data-mini-rdoc="staRdom::cor">cor</a></code></dd></dl>

Arguments

Calculating correlations between the component loadings in all samples (C-Modes). — eempf_cortable

<dl>

<dt>pfmodel</dt>
<dd>results from a PARAFAC analysis, class parafac</dd>


<dt>normalisation</dt>
<dd>logical, whether normalisation is undone or not</dd>


<dt>method</dt>
<dd>method of correlation, passed to <code><a href='https://rdrr.io/r/stats/cor.html'>cor</a></code></dd>


<dt>...</dt>
<dd>passed on to <code><a href='https://rdrr.io/r/stats/cor.html'>cor</a></code></dd>

</dl>

eempf_cortable: Calculating correlations between the component loadings in all samples (C-Modes).

Description

Usage

Value

Arguments

Examples