eempf_export

Create one table containing the PARAFAC models factors and optionally exporting it to csv or txt

This is a user-friendly way to run a parallel factor (PARAFAC) analysis (Harshman, 1971) <doi:10.1121/1.1977523> on excitation emission matrix (EEM) data from dissolved organic matter (DOM) samples (Murphy et al., 2013) <doi:10.1039/c3ay41160e>. The analysis includes profound methods for model validation. Some additional functions allow the calculation of absorbance slope parameters and create beautiful plots.

Matthias Pucher

staRdom

PARAFAC Analysis of EEMs from DOM

Daniel Graeber

Stefan Preiner

Renata Pinto

eempf_export function

<dl><dt>pfmodel</dt>
<dd>PARAFAC model</dd>
<dt>export</dt>
<dd>file path to export table</dd>
<dt>Fmax</dt>
<dd>rescale modes so the A mode shows the maximum fluorescence</dd>
<dt>...</dt>
<dd>additional parameters passed to <code><a href="/link/write.table?package=staRdom&version=1.1.28" data-mini-rdoc="staRdom::write.table">write.table</a></code></dd></dl>

Arguments

Create one table containing the PARAFAC models factors and optionally exporting it to csv or txt — eempf_export

<dl>

<dt>pfmodel</dt>
<dd>PARAFAC model</dd>


<dt>export</dt>
<dd>file path to export table</dd>


<dt>Fmax</dt>
<dd>rescale modes so the A mode shows the maximum fluorescence</dd>


<dt>...</dt>
<dd>additional parameters passed to <code><a href='https://rdrr.io/r/utils/write.table.html'>write.table</a></code></dd>

</dl>

eempf_export: Create one table containing the PARAFAC models factors and optionally exporting it to csv or txt

Description

Usage

Value

Arguments

Examples