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statgenSTA

R package for single trial analysis

Implemented functionality

The following functionality has been implemented:

  • Single trial analysis
    • Single trial analysis using SpATS, asreml or lme4
    • Computation of statistics e.g. BLUEs, BLUPs, SE of BLUEs, SE of BLUPs and heritability based on the fitted models.
  • Plotting and reporting (.pdf and .tex) functions for most raw and fitted data.

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Version

Install

install.packages('statgenSTA')

Monthly Downloads

739

Version

1.0.2

License

GPL

Maintainer

Bart-Jan van Rossum

Last Published

January 14th, 2020

Functions in statgenSTA (1.0.2)

TDMaize

Field data for a maize experiment in Tlaltizapan, Mexico
as.data.frame.extract

Coerce extracted heritabilities to data.frame
STAtoCross

Convert STA to Cross
summary.TD

Summarizing objects of class TD
plot.STA

Plot function for class STA
plot.TD

Plot function for class TD
STAtoTD

Convert STA to TD
extract

Extract statistics from Fitted Models
fitTD

Fit Single Trial Mixed Model
TDHeat05

Field data for a wheat experiment in Mexico
TD

S3 class TD
wheatChl

Field data for a wheat experiment in Chili
report

Base method for creating a report
report.STA

Report method for class STA
outlierSTA

Identifying outliers in objects of class STA
getMeta

Get and set metadata for TD objects
summary.STA

Summarizing objects of class STA
statgenSTA-package

statgenSTA: Single Trial Analysis (STA) of Field Trials