# pairwise.t.test

##### Pairwise t tests

Calculate pairwise comparisons between group levels with corrections for multiple testing

- Keywords
- htest

##### Usage

```
pairwise.t.test(x, g, p.adjust.method = p.adjust.methods,
pool.sd = !paired, paired = FALSE,
alternative = c("two.sided", "less", "greater"),
…)
```

##### Arguments

- x
response vector.

- g
grouping vector or factor.

- p.adjust.method
Method for adjusting p values (see

`p.adjust`

).- pool.sd
switch to allow/disallow the use of a pooled SD

- paired
a logical indicating whether you want paired t-tests.

- alternative
a character string specifying the alternative hypothesis, must be one of

`"two.sided"`

(default),`"greater"`

or`"less"`

. Can be abbreviated.- …
additional arguments to pass to

`t.test`

.

##### Details

The `pool.sd`

switch calculates a common SD for all
groups and uses that for all comparisons (this can be useful if some
groups are small). This method does not actually call `t.test`

,
so extra arguments are ignored. Pooling does not generalize to paired tests
so `pool.sd`

and `paired`

cannot both be `TRUE`

.

Only the lower triangle of the matrix of possible comparisons is being
calculated, so setting `alternative`

to anything other than
`"two.sided"`

requires that the levels of `g`

are ordered
sensibly.

##### Value

Object of class `"pairwise.htest"`

##### See Also

##### Examples

`library(stats)`

```
# NOT RUN {
attach(airquality)
Month <- factor(Month, labels = month.abb[5:9])
pairwise.t.test(Ozone, Month)
pairwise.t.test(Ozone, Month, p.adj = "bonf")
pairwise.t.test(Ozone, Month, pool.sd = FALSE)
detach()
# }
```

*Documentation reproduced from package stats, version 3.5.1, License: Part of R 3.5.1*