fasta

read.fasta

write.fasta

a FASTA-formatted file of sequences.

file

a list or a matrix of DNA sequences (see <code><a rd-options="ape" href="/link/write.dna?package=strataG&version=2.4.905&to=ape" data-mini-rdoc="ape::write.dna">write.dna</a></code>), 
or a <code><a rd-options="" href="/link/gtypes?package=strataG&version=2.4.905" data-mini-rdoc="strataG::gtypes">gtypes</a></code> object with sequences.

Read and write FASTA formatted files of sequences.

A toolkit for analyzing stratified population genetic data.
Functions are provided for summarizing and checking loci
(haploid, diploid, and polyploid), single stranded DNA sequences,
calculating most population subdivision metrics, and running external programs
such as structure and fastsimcoal. The package is further described in
Archer et al (2016) <doi:10.1111/1755-0998.12559>.

Eric Archer

strataG

Summaries and Population Structure Analyses of Genetic Data

Brita Schneiders

Paula Adams

Sarina Fernandez

Warren Asfazadour

fasta function

a list or a matrix of DNA sequences (see <code><a rd-options='ape' href='write.dna'>write.dna</a></code>), 
or a <code><a rd-options='' href='gtypes'>gtypes</a></code> object with sequences.

fasta: Read and Write FASTA

Description

Usage

Arguments

Value