superFreq (version 1.2.3)

superInputFiles: sets up and checks the input files for superFreq

Description

sets up and checks the input files for superFreq

Usage

superInputFiles(metaDataFile = "", captureRegions = "",
  normalDirectory = "", dbSNPdirectory = "", reference = "",
  normalCoverageDirectory = "")

Details

Returns the input files in a format to be passed to analyse(). Returns detailed information about the required input files if missing.

Examples

# NOT RUN {
superInputFiles()
# }