survJamda (version 1.1.4)

survJamda-package: Survival Prediction by Joint Analysis of Microarray Gene Expression Data

Description

Prediction of survival and risk assessment of patients using joint analysis of microarray gene expression data.

Details

Package:

survJamda

Type:

Package

Version:

1.1.4

Date:

2015-11-01

Depends:

survival, survivalROC, ecodist, survcomp, survJamda.data

License:

GPL (>= 2)

LazyLoad:

yes

References

Haleh Yasrebi, Comparative study of joint analysis of microarray gene expression data in survival prediction and risk assessment of breast cancer patients, Brief Bioinform, 2015 doi:10.1093/bib/bbv092, PMID:26504096.

Yasrebi H. SurvJamda: an R package to predict patients' survival and risk assessment using joint analysis of microarray gene expression data. Bioinformatics. 2011 Apr 15;27(8):1168-9. doi: 10.1093/bioinformatics/btr103. Epub 2011 Mar 2. PubMed PMID: 21367873.

Yasrebi H., Sperisen P., Praz V., Bucher P., Can Survival Prediction Be Improved By Merging Gene Expression Data Sets?, PLoS ONE 4(10): e7431. doi:10.1371/journal.pone.0007431, 2009, PMID: 21367873.

Yasrebi, H. Prediction of survival and risk assessment using joint analysis of microarray gene expression data, PhD thesis, EPFL, Switzerland, doi:10.5075/Thesis 4494, 2010, PMID: 19851466.

See Also

coxph, survivalROC, corgen, p.adjust, concordance.index, sbrier.score2proba