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survMisc (version 0.4.5)

Miscellaneous Functions for Survival Data

Description

A collection of functions for analysis of survival data. These extend the methods available in the survival package.

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Version

Install

install.packages('survMisc')

Monthly Downloads

29,259

Version

0.4.5

License

GPL-2

Maintainer

Chris Dardis

Last Published

February 25th, 2015

Functions in survMisc (0.4.5)

gamTerms

Individual terms of a Generalized Additive or Cox Proportional Hazards Model

autoplot.survfit

Generate a ggplot for a survfit object

tneBMT

Time, no. at risk, no. events for BMT data

cutp

Cutpoint for a continuous variable in a coxph or survfit model

profLik

Profile likelihood for coefficients in Coxph model

quantile

Quantiles and median for Surv, survfit and coxph objects

lrSS

Sample size required to show difference in survival by log-rank test given prior information about Kaplan-Meier estimate

Confidence intervals for survival curves

autoplot.rpart

Generate a ggplot for an rpart object

multi

Multiple coxph models

Estimates of survival (or hazard) function based on $n$ and $e$

survMisc-package

Miscellaneous Functions for Survival Analysis.

sig

Significiance tests of coefficients in a coxph model

gof

Goodness of fit test for coxph models

mpip

Multi-center Post-Infarction Project

gastric

gastric cancer trial data

Information criterion

comp

Compare survival curves

Diagnostics for coxph models

tne

Time, No. at risk, No. events

plotTerm

Plot individual terms of a Generalized Additive gam or Cox Proportional Hazards coxph Model

local

Local tests for a model

autoplot.tableAndPlot

Arrange and plot a survival plot, it's legend and a table.

genSurv

Generate survival data

tableRhs

Table the outcome against all predictors in a formula

Dataset.

whas500

Worcester Heart Attack Study WHAS500 Data

rsq

r^2 measures for a a coxph or survfit model

tneKidney

Time, no. at risk, no. events for kidney

plot.MultiCoxph

Plot a multi.coxph object

whas100

Worcester Heart Attack Study WHAS100 Data

air

Environmental data timeseries

mean.Surv

Mean for Surv object

as.Surv

Convert time and status to a right-censored survival object, ordered by time

covMatSurv

Covariance matrix for survival data

plot.Surv

Plot Survival object

btumors

Brain tumors trial data